| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0913 |
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| Symbol | |
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| ID | 3522808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 914221 |
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| End bp | 916569 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637283378 |
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| Product | sensory box protein |
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| Protein accession | YP_267662 |
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| Protein GI | 71282335 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGTT TACAAAATAA AATATTTTTA TTGTTTGTCA TACTGTTATT AATGGTTCAA
GCCATTGCTT TTTGGACTCT ATATAGCGAA AAGAAAAATC AAGAAGCGGC AGAAATTAAT
AACCGTTTAA CGACAGCAAA AACCATTTTT ACCGAGTTAT TTGATCGCAG ACTGACCTAT
TTATCTACTT TTGCTGAAAC AGTAGCGAAA GATTATGGTT TAAAAGAAGT CTTTAATGAG
GATACTCGCA GTTTATTATT TGCGTTAAAT AATCATAGAA AACGTATTGA TGCTGATTTG
GCCATGACCA TCTCTTCAGC AGGGATCATC AATGGACAAT TACAACGTCA TTTTGTAAAC
GGTAAAGGTA AAATTCGACA AGGCGCTGAA CGAAACAGTG CCTTTCGTTT CAGTGAATGG
CTTGAAACCG GTCAAGCAGC GCATTTATAT ATGATTGATG ATGCACTTTA TCAATTGAGT
TTATCGCCAG TTACTGTGGG AGCTAAAACG TTAGGATGGA TCGCTTTTGG TTTTGAAATA
GATGAGCGAT TAGCGGATGA ATTTAAAAAT ATTACTGGTT TAAATACCGA TTTTATTATC
AAAAATGAAG GTGCGTGGCA GTTGATTTCA GTTGTCCAGA GTAGTGAAAA CAATGAAAGT
TACGATAAGT TACTAGAGTT GGCGGTGCAG GTTATTGAAA ATAAAGCCCC CGATCAATAT
ATCGCTACTC ACTCATTAAT CACCGAATTT GATGACCAAG AATTCGGTGT TGCCATGCAT
GGTTTACGAG CTAATTTTGT CGCCTTATTG CAAGAACAGT GGTGGAAGTT TTTATTCCTA
GCAGCGTTAA CCCTATTGTT GTCACTTACT AGTGCTTATT TTATTGCGGG CTCTATTAGT
AAGCCGATTA AACGCTTGGT TGCTCAAGCT AAAGTAATCG CCAGCGGAGA TTATCAGCAA
AAAGTTACGT TAAAAGATAA CAATGAAATA GGGCAACTTG CAGACGAATT TAATCAAATG
CAAGCTGCGG TATTACAGCG TGAAGAAGCG ATTACTCATC GTGCAGATCA TGATCCATTA
ACGGATTTAC CCAACCGAAA CAAACTCAAT AAAACCCTAA AAAAACTCAT AGAACAACAG
AAAAATTTTC TAGTTTTACA TTTAAATCTT AGTCGTTTGA AAGATGTTAA CGATACATTG
GGTCATGATG TAGGTGATGA AGTTATTAAA GAACTTGCAA GTCGTTTACA TAATCTTTGT
CAAATGAATA GTTTTAACGC CTTGGCACAT TTAGGAGCAG ATGAATTTAT TTTATTGGTA
GAACATTTGA AGGTCGATGA AGCTATTTAT CAGCTAAGAG CTGAGCTTGA ACCAATATTT
GATTATCAGG GCATTAGCTT ACAGCTGCAA GTTAGGATTG GCGTAGCAGC GTATCCTGAG
CATGCTGTTG ATGATAAATC ATTATTACAA ATGGCAGATA CGGCGCTAAA CAGTACAAGA
GAGAAGAGGA AGTTAGTACA AATATACCAT CCTGATCTTG ATGTTAATAC GGTTGAGCGT
TTAAGTTTGA TTAACGATTT GAAACAAGCT ATTCCGGCAG GTGAGTTGGA ATTACACTTT
CAACCTAAAA TGTGTTTAAA AACTAAAACG GTAACTCACG CCGAAGCATT AGTTCGCTGG
CAGCACCCTA CATTAGGCAT GGTGCCTCCT GATAATTTTA TTCACATTGC AGAACAAACA
GGTCAAATTA AGGCGTTAAC ACGTTGGGTA TTTATTACCG CATTGGACCA ATATAATGCT
TGGCAAGAAC AGGGTATTGA TTTGAATATA GCGATAAATG TTTCTGCAGA AAATTTAAAA
GAGAACGATT TTCATCACTT TATCTGTCAG TCAATTATGG CGGCCAAGGT ACCTGCAGAA
AAAATTACGC TGGAAGTGAC CGAGAGCTCT GTAGTAGAAG ACCCTGAGGC GGCAATTAAA
TTATTGGCAG AATTTAAAGA TTACGGTATG AAAATATCGA TCGATGATTA CGGCACGGGT
TATTCATCAT TAGCACAATT GAAACAATTG CCAGTACATG AATTAAAAAT AGATAAATCA
TTTATTCAAC ACCTTGAACA TGATGAAGAT GATCAAATTA TAGTGCGCTC CACAATTGAA
CTTGCTCATA ATATGGGACT GCACGTGGTT GCTGAGGGAA TAGAAGATGA ATTTGCGTTA
AATTGGTTAG CAGCTCATGG CTGTGAACTT GCGCAGGGTT ATTATATCAG TAAACCAAAA
CCGGCCATGG AGTTAACTCC ATGGCTGTTA GCACAGTTAA CTATTCAAGA TGTTGAGGAA
AAGGTTTGA
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| Protein sequence | MKSLQNKIFL LFVILLLMVQ AIAFWTLYSE KKNQEAAEIN NRLTTAKTIF TELFDRRLTY
LSTFAETVAK DYGLKEVFNE DTRSLLFALN NHRKRIDADL AMTISSAGII NGQLQRHFVN
GKGKIRQGAE RNSAFRFSEW LETGQAAHLY MIDDALYQLS LSPVTVGAKT LGWIAFGFEI
DERLADEFKN ITGLNTDFII KNEGAWQLIS VVQSSENNES YDKLLELAVQ VIENKAPDQY
IATHSLITEF DDQEFGVAMH GLRANFVALL QEQWWKFLFL AALTLLLSLT SAYFIAGSIS
KPIKRLVAQA KVIASGDYQQ KVTLKDNNEI GQLADEFNQM QAAVLQREEA ITHRADHDPL
TDLPNRNKLN KTLKKLIEQQ KNFLVLHLNL SRLKDVNDTL GHDVGDEVIK ELASRLHNLC
QMNSFNALAH LGADEFILLV EHLKVDEAIY QLRAELEPIF DYQGISLQLQ VRIGVAAYPE
HAVDDKSLLQ MADTALNSTR EKRKLVQIYH PDLDVNTVER LSLINDLKQA IPAGELELHF
QPKMCLKTKT VTHAEALVRW QHPTLGMVPP DNFIHIAEQT GQIKALTRWV FITALDQYNA
WQEQGIDLNI AINVSAENLK ENDFHHFICQ SIMAAKVPAE KITLEVTESS VVEDPEAAIK
LLAEFKDYGM KISIDDYGTG YSSLAQLKQL PVHELKIDKS FIQHLEHDED DQIIVRSTIE
LAHNMGLHVV AEGIEDEFAL NWLAAHGCEL AQGYYISKPK PAMELTPWLL AQLTIQDVEE
KV
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