| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0900 |
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| Symbol | |
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| ID | 3521652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 901027 |
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| End bp | 902031 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637283365 |
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| Product | phage integrase family site specific recombinase |
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| Protein accession | YP_267649 |
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| Protein GI | 71281181 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.198351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAA TTAAAAAAGT ACAAGATGGA ATTTGGAAAA CCGATTCAGA AAGTAAGCCT
TATCAAATTG ACTTTAGACC TAATGGCCAC CACGGCAAAC GATACAAAAA AAGCTTCTTA
ACACTTGGTG AAACAAGGCG GTTTATGAAC CATTTAATTT CAGAAAATAA TGGTTTAAAA
GAATGGCAAC CTGATACAGA CGATAATCGA AAGTTAAGCA CAATTATTGA TTTATGGCAT
AAGTTACATG GCAAAAATTT AATTGAAGAA AAAGCGCTAC TTCAAAAGTT AAAAAATATG
TGTAAAGGAC TTAATGATCC TATTGCTAGA AAGTTAACGC CTAAAGTATG GGTAGCATAC
AGAGCTATAA GATTAGAGAA AGTATGCGCT AAAACTGTAA ATGAAGACCA AAATAAAATT
AAAGGCGTAT TTAATGAGCT GATAAGGCTT GGGGAATTAA AAACAAACCC ACTAAACGGG
CTTAAAAACT TAAAGTATTC AGCGCCTGAA ATGGGATTCT TTTCAAAGAA CGAAATGATG
ACCTTATTAA ATGAGCTAAA GAACTCAGAC AATATTGATG CTTATTACAT TTCAAAAATA
TGTTTATCAA CTGGTGCAAG GTGGGGAGAA GCTGAAAAAC TACTAAGTAG AAACTTAAGA
GACAACTTCA TTACATTCAT TAAAACCAAA AATGGCAAGA CAAGAATAAT CCCCATATCA
GACGAGCTTA AAAATGAAAT ACCCGAAAAA GAGGGTAGAT TGTTTAGTGA CAGCATGAAA
ACATTTAGAA CGTCATTAGC TAAGACCGGT ATAACACTCC CCAAAGGACA AGCTACACAT
GCTTTAAGAC ATACATTTGC TAGTCATTTT ATGATGAATG GCGGGAATAT TCTGGTACTA
AAAGAAATAC TCGGACATGC ACGAATTGAA GAAACTATGA AGTATGCACA CTTTTGTAAA
ACACACTTAC ACGATGCCGT GATGCTAAAT CCAATCAGTA AATAA
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| Protein sequence | MKKIKKVQDG IWKTDSESKP YQIDFRPNGH HGKRYKKSFL TLGETRRFMN HLISENNGLK
EWQPDTDDNR KLSTIIDLWH KLHGKNLIEE KALLQKLKNM CKGLNDPIAR KLTPKVWVAY
RAIRLEKVCA KTVNEDQNKI KGVFNELIRL GELKTNPLNG LKNLKYSAPE MGFFSKNEMM
TLLNELKNSD NIDAYYISKI CLSTGARWGE AEKLLSRNLR DNFITFIKTK NGKTRIIPIS
DELKNEIPEK EGRLFSDSMK TFRTSLAKTG ITLPKGQATH ALRHTFASHF MMNGGNILVL
KEILGHARIE ETMKYAHFCK THLHDAVMLN PISK
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