| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0840 |
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| Symbol | |
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| ID | 3520197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 854677 |
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| End bp | 855669 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637283305 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_267589 |
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| Protein GI | 71279736 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.916839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATTC ACCAACAAAT CCCCAGTACC ACTATCGACA ACAATGTTAG AGGTATATCA
ACATCTGATG TTGACGAACT TTCTCAATTC CAACTCAATA AAAATCGACG ATATACTCAA
CTACAAGCAG GCCAATTAAA TGGTGCTTAT CTAGAGGCAA ACTTAGGTGA TGTGCAAATT
TTTCGTGAAA GTCTTAATGC TGGCGCATTG ATTGAAGCTG CACCAGCGAG CTCATTTTTA
CCCTTTGCAG CTATTACTTC CAATGCGGAC AACTTTAAAT ACTGTGGTAA ACAAAGAGAA
AAGAATACCG TATTGCAAGC CACCGGTGGT TTTTGGGATG CGAGTTTTCA ACATAGTTTA
AATTTTGTCG TTGCCGCTTT TGATAGAAAG GCTTTTAGCC GTAGTATTGA GTTGCTCACC
GGAGAAGAAG TTCCCCAAGC TTGGTTTGTC AGTCAAGCTT GCTTAACGGA GCCTCATGCC
TTGAAAACCT ATGCCTGTGG CTTAGATAAT ATTCTTACTA TTATTAAAAG TAGACCTGAA
ATATTAAAAA AAGATAATGT TCAACGAATG CTGTCGGATA GTATTTTAAG GTTGATACTT
AAAGTACTTA GCAAAACAAC ACCGATTAAT GTACAACAAG TTAGCCCCTC AAATAGGGCT
CAAGGTGTTC GTATGGTTAT TGATTATCTT CATCATTACG CAGACCAAGT CCCCACGATT
CCTGAACTTT GTAATATTGC AAAATTAAGC GAAAGAAACC TTCAATACGG TTTTAATGAA
TACTTAGGTA TTACGCCTAT ACGCTATTTA CGATTGGTAC GACTCAATGG TGTAAAGCGT
GATTTATTAC TTTCTCACCC CAAAAAAGAT CGCATTGTTG ATATAGCACT TAACTGGGGA
TTTATTGAAT TGGGCCGCTT TGCAGGAGAA TATCGTCAGC TATTTCAAGA GTTACCTTCT
GTGACACTCA ATAAGCTAAA TCAGACAAAA TAA
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| Protein sequence | MEIHQQIPST TIDNNVRGIS TSDVDELSQF QLNKNRRYTQ LQAGQLNGAY LEANLGDVQI
FRESLNAGAL IEAAPASSFL PFAAITSNAD NFKYCGKQRE KNTVLQATGG FWDASFQHSL
NFVVAAFDRK AFSRSIELLT GEEVPQAWFV SQACLTEPHA LKTYACGLDN ILTIIKSRPE
ILKKDNVQRM LSDSILRLIL KVLSKTTPIN VQQVSPSNRA QGVRMVIDYL HHYADQVPTI
PELCNIAKLS ERNLQYGFNE YLGITPIRYL RLVRLNGVKR DLLLSHPKKD RIVDIALNWG
FIELGRFAGE YRQLFQELPS VTLNKLNQTK
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