Gene CPS_0729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0729 
SymbolnrdR 
ID3522119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand+ 
Start bp730921 
End bp731418 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content39% 
IMG OID637283194 
Producttranscriptional regulator NrdR 
Protein accessionYP_267479 
Protein GI71281647 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATTGTC CATTTTGTTC AGCTAATGAC ACTAAAGTCA TCGATTCACG TTTAGTTTCT 
GATGGCCATC AAGTAAGACG ACGTCGTGAA TGTTTAGCTT GTCACGAACG TTATACAACA 
TTTGAAAGTG CTGAATTGGT GATGCCAAGA ATCATAAAAC GTGATGGCAG CAGAGAACCG 
TTTAACGAAG ATAAAATGCT TAGTGGTTTA ACCCGAGCAT TAGAAAAACG CCCTGTAAGC 
ATGGAACAAA TAGAGTTGGC GGTTAATAAG CTGAAGTCTC AAATGCGCGC TACTGGTGAA 
CGAGAAATTA GCAGTGAAAT GCTAGGAGAC TTAATTATGG CGCAGCTTAA AGAATTAGAT 
AAAGTTGCTT ACTTACGTTT CGCTTCTGTT TATTTGTCCT TTGAAGATAT CAGCGAGTTT 
GCTGATGAGA TCACGCGATT AGGAAAAGAA AAAAACGGTA AAGCAAAAAA GGCTAAACCA 
GCGAAAACGG CTAAATAA
 
Protein sequence
MYCPFCSAND TKVIDSRLVS DGHQVRRRRE CLACHERYTT FESAELVMPR IIKRDGSREP 
FNEDKMLSGL TRALEKRPVS MEQIELAVNK LKSQMRATGE REISSEMLGD LIMAQLKELD 
KVAYLRFASV YLSFEDISEF ADEITRLGKE KNGKAKKAKP AKTAK