Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0405 |
Symbol | mpl |
ID | 3520268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 412394 |
End bp | 413833 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637282870 |
Product | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase |
Protein accession | YP_267163 |
Protein GI | 71279807 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.152417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAATA AAATTCAACA CCTTCATATC TTAGGTATTT GTGGCACTTT TATGGGAGGG ATCGCTGCTA TAGCCAAGCA ACTTGGCTTT AAAGTTAGTG GTTCTGATGC CAATGTCTAT CCGCCAATGA GCACTCAGTT AGAGCAGTTA GGCATTGAGT TAATGTCAGG TTATCAAGTC GATAATTTCT CTGATGATAT CGATTTGGTT ATTGTTGGCA ATGCGATGTC TCGTGGAAAT CCAATGGTGG AATATATGCT AGATCGCAAT ATTCCTTATA CATCAGGCCC ACAATGGTTG CTTGAAAATG TATTAAAAGA TCGTTGGGTC CTTGCCGTTT CGGGTACGCA TGGTAAAACA ACGACCAGTA GTATGCTGGC GTGGATTTTA GAGTATGCTC ATATGTCGCC AGGTTTTCTT ATCGGTGGAG TACCACAAAA TTTCTCTAGT TCAGCTCGTT TAGGTGATAC ACCTTTCTTT GTCATTGAAG CTGACGAGTA CGATAGCGCC TTTTTTGATA AACGATCTAA ATTTGTGCAT TACCGTCCAC GAACTCTAGT GATTAATAAC TTAGAGTTTG ATCATGGTGA TATTTTTAAT GATCTCAGTG ATATTCAAAA ACAATTTCAT CACCTCATCC GTATGGTGCC AAGTAATGGT TTGATTTTAT CACCCGCTAA TGAAGAAGCT ATTACTGAAA CGTTAGCTAT GGGCTGTTGG ACACCGACCG AATTCTCTAA TGGAGAGCTT CAACAAGATG AACCGTCCGA TGCAGGTTGG CAAGTCGAAA AATTAAATGC TCAGGGCAGT GAGTTTATCG TTAAGTTTAA CGGTAAAGAG CAAGGTGTGG TCAAGTGGGA TCTTATCGGT GATTTTAATA TCGATAACGC AGTGATGGCA ATAGCGGCAG CACGCCATGC GGGTGTGCCA AGCGCAGTCT CTATTGAAGC GTTAGCCGAG TTTATTAATA CTAAGCGTCG TTTTGAGCTT CGAGGTATAG TTAATAATAT TAGTGTGTAT GATGATTTTG CTCATCACCC AACGGCCATA GCAAAAACAT TAGCTGGTGT ACGTGCTAAA CTTTCACAAC AAGAAAGTGA GCAAGAACAA GTTGGGCGCA TTTTCGCAGT ATTAGAGCCA AGATCGAATA CCATGAGATC AGGAGTTCAT AAAGAATCAT TACCTAAGTC ATTGATTGAT GCGGATCAGG TTTTTATCTA TCAAGGTGAA CAGGTGACTT GGTCAGTGAG TGATTTAATC AAACAATGCA AGCCAGCGTG TCAAGTTGAA GACAATGTTG AACGCTTAGT GGAATCTATT GCCCAACAAG CGCAAGCTGG CGACATAATT GTTGTTATGA GCAACGGTGG TTTTGCCGAC ATTCATAATA AATTATTGAA CCGTTTAGCG AATATACCCG TACCACTTGA AGATGCATGA
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Protein sequence | MTNKIQHLHI LGICGTFMGG IAAIAKQLGF KVSGSDANVY PPMSTQLEQL GIELMSGYQV DNFSDDIDLV IVGNAMSRGN PMVEYMLDRN IPYTSGPQWL LENVLKDRWV LAVSGTHGKT TTSSMLAWIL EYAHMSPGFL IGGVPQNFSS SARLGDTPFF VIEADEYDSA FFDKRSKFVH YRPRTLVINN LEFDHGDIFN DLSDIQKQFH HLIRMVPSNG LILSPANEEA ITETLAMGCW TPTEFSNGEL QQDEPSDAGW QVEKLNAQGS EFIVKFNGKE QGVVKWDLIG DFNIDNAVMA IAAARHAGVP SAVSIEALAE FINTKRRFEL RGIVNNISVY DDFAHHPTAI AKTLAGVRAK LSQQESEQEQ VGRIFAVLEP RSNTMRSGVH KESLPKSLID ADQVFIYQGE QVTWSVSDLI KQCKPACQVE DNVERLVESI AQQAQAGDII VVMSNGGFAD IHNKLLNRLA NIPVPLEDA
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