Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0384 |
Symbol | speB |
ID | 3523380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 385149 |
End bp | 386105 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637282849 |
Product | agmatinase |
Protein accession | YP_267142 |
Protein GI | 71278050 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
TIGRFAM ID | [TIGR01230] agmatinase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.958306 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGATA ATAATTTCAA TCAGCCATTA GGCGGTAATC AAATGCCACG TTTCGGTGGT CCAGGTACTA TGTTTCGCTT ACCAAGCAGT GAAATAAGCA ATGAATTAGA TATAGGTATT GTAGGTGTGC CACTGGATAT TGGTGCTAGT AACCGAAGTG GTACACGCTT TGGCCCTCGT TCTGTTCGCA ATGAATCAGT CTTAGTTCGT CCTTACGGTA TGTATACCAA AGCTGCGCCA TTTGATAGTT TCCAAATTGC AGACATTGGT GATACTCCAA TAAATACATT CAATCTTGCT GACTCTATTC GAATTATTGA AGCGCATTAC GATACCATTA TGGCGAGTAA TATTAAGCCA GTGACTGTTG GTGGCGATCA CACTATCAGT TTGCCTATCT TGAGAGCCTT GCATAAAAAG CACGGCATGA TGGCATTAGT TCATGTTGAT GCCCATGCGG ATATTAATGA TTCTATGTTT GGTGAAAAAG AGTGCCACGG TACTATTTTC AGACGTGCTA TTGAAGAAGG TTTAGTTGAC CCGAAAAAAA TGATTCAAAT TGGTCAACGT GCAACCGGTT ATAGTGCGGG TGATTTTCAA TGGGCGGTGG ACCGAGGCGT AAGAGTTGTA CAGGCAGAAG AATGTTGGTT GAAATCGTTA GTGCCCTTAA TGGAAGAGGT GCGTGAGGTT ATTGGTGAAG ATATACCGAC TTATTTAACG TTTGATATTG ATGGTATTGA TCCAGCATTT GCGCCAGGAA CTGGCACACC AGAGCCAGCA GGGTTAACCT CGCCACAAGC CTTAGAGATC ATTCGTGGCA TGTGGGGTAC TAATCTTATT GGTGCTGACT TAGTTGAGGT ATCACCACCA TATGATACTT CAGGTAATAC CTCCTTATTA GCAGCCAACC TCATTTTTGA AATGCTTTGT AGCTTTCCAG GTTGTATTCG TAGATAA
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Protein sequence | MTDNNFNQPL GGNQMPRFGG PGTMFRLPSS EISNELDIGI VGVPLDIGAS NRSGTRFGPR SVRNESVLVR PYGMYTKAAP FDSFQIADIG DTPINTFNLA DSIRIIEAHY DTIMASNIKP VTVGGDHTIS LPILRALHKK HGMMALVHVD AHADINDSMF GEKECHGTIF RRAIEEGLVD PKKMIQIGQR ATGYSAGDFQ WAVDRGVRVV QAEECWLKSL VPLMEEVREV IGEDIPTYLT FDIDGIDPAF APGTGTPEPA GLTSPQALEI IRGMWGTNLI GADLVEVSPP YDTSGNTSLL AANLIFEMLC SFPGCIRR
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