Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0328 |
Symbol | hflC |
ID | 3520665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 339292 |
End bp | 340179 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637282793 |
Product | HflC protein |
Protein accession | YP_267094 |
Protein GI | 71280201 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.791365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAATT TTTTCATTGC TATAATATCA CTACTTCTTA TCTTAGCTGT ATCGTCAGTT TTTGTTATTT ACGAAGGCCA ACGTGGCATC GTATTTCAAT TCTCAAAAAT TAAGCGTGAT AGTGCTACTG ATGAAATGAT GGTGTATGAA CCAGGTTTAC ATTTCAAAAT TCCATTTATT GAGACAGTAC GTAAGTTAGA TGCACGTATT CAAACATTGG ATGAACCAGC AGATCGTTTT GTTACTTCAG AGAAAAAAGA TTTAATGGTC GATTCATTTG TGAAATGGCG CATTGTTGAT TTCTCTACAT ACTACCTACG TACTTCAGGC TCTGTAGATA ATGCTCGTGC ATTATTAAAG CAAAAAGTGA ATAACGGGTT ACGTACAGAG TTTGGTAACC GCACCATTAA AGAAATCGTT TCAGGTGATC GTGACGCGAT AATGAGTAAA GCGCTAGAAA GTGCTGCGAG TAGCCGTGAA GATCTTGGCA TAGAAGTTGT TGATGTCCGT ATTAAAGCGA TTAACCTACC GACAGAAATA AGTCAGTCTA TTTATGAGCG TATGCGTGCT GAGCGAACTG CTGTTGCTAA AGAACATAGA TCACAAGGTC AAGAGCAAGC AGAGATTATT CGCGCTACTA TTGATGCTAA AGTGACAGTA ATGTTAGCAG AAGCACAAAA GAACTCTTTT ACGGTCCGTG GTGAAGGTGA TGCACTAGCA GCAAAAGTCT ATGCAGATGC TTACAGCAAA GATGCAGATT TCTATAGTTT CTATCGTAGT CTTGAGGCTT ATGAAAAAAG CTTTAATAGT AAAAATGATA TCATGGTGGT TAAACCTGAT AGCGAATTCT TCCGTTTTTT GAAAGACGGC AGTGACGTTA AAAAATAG
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Protein sequence | MKNFFIAIIS LLLILAVSSV FVIYEGQRGI VFQFSKIKRD SATDEMMVYE PGLHFKIPFI ETVRKLDARI QTLDEPADRF VTSEKKDLMV DSFVKWRIVD FSTYYLRTSG SVDNARALLK QKVNNGLRTE FGNRTIKEIV SGDRDAIMSK ALESAASSRE DLGIEVVDVR IKAINLPTEI SQSIYERMRA ERTAVAKEHR SQGQEQAEII RATIDAKVTV MLAEAQKNSF TVRGEGDALA AKVYADAYSK DADFYSFYRS LEAYEKSFNS KNDIMVVKPD SEFFRFLKDG SDVKK
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