Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0218 |
Symbol | |
ID | 3520175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 223957 |
End bp | 224778 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637282684 |
Product | competence protein,-like protein |
Protein accession | YP_266985 |
Protein GI | 71279715 |
COG category | [R] General function prediction only |
COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0828937 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTATTAG TTTATATCAT AAGGCAAAAG GTAAGCAATA TGGCATGGAA GCTAGATTCA AATATATTTA AGCGGTATTA CATCGATACA CTCAAGAGTA TAAGCTGCTG TGATTTGTGC GGCGCAAACG TCAGTGATAG CTATCTACTT GGTTATTCGT TATCACAAGC ACTACTCTGT CAGTCCTGTG TAAATGATTT GCCCTATTTC AATCAAAGTC TAATCGCAGG TAATTTACTA CGTTGGCCTG CGGTTCACCG TGCGTTACCC AATATTCACT TTGAACAGTT ATTTGCGTTA TCACCTTATA TTTACCCCTT TAATAAATGG TTAGCTCAAA TGAAATACTT AGGGCGTTTC GAGTTAGCAA GTTTATTTAG TGTATTACTT TGTGCTCAGT GGCAAGCAAT GATAATGAAT CAAACCATTA TCCCCATTAA TTTAGTGCTA GCAGTACCTC TACATATTAA GAAATGGCAG GTTCGTGGTT ATAACCAAGC GCATCTCATT GCAAAGACCT TTGCCGAGAC ATTATCATTA CCCTATGACG CCAACTTAGT GCTGAGAGTA AAAAACAATG ATAGCCAAAT GGGAAAAACG GGCAGTCAAC GACGAAAAAA TTTAGCCAAC GCCTTTGCTT TACAAAGAAA GTTAGGAAGC CATATAAAAC ATGTTTTGAT TGTTGATGAT GTGGTCACAA CTGGCACCAC AGTCAGTGAG ATAAGCAAAC TGTTAAAACA AGCTGGCGTT GAAACCGTTA CCTTAGTAAC GGTTTGTTTA ACAGTGCCTA ATGCGAAGGA TAATGGACCC GTGATTAGTT AA
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Protein sequence | MVLVYIIRQK VSNMAWKLDS NIFKRYYIDT LKSISCCDLC GANVSDSYLL GYSLSQALLC QSCVNDLPYF NQSLIAGNLL RWPAVHRALP NIHFEQLFAL SPYIYPFNKW LAQMKYLGRF ELASLFSVLL CAQWQAMIMN QTIIPINLVL AVPLHIKKWQ VRGYNQAHLI AKTFAETLSL PYDANLVLRV KNNDSQMGKT GSQRRKNLAN AFALQRKLGS HIKHVLIVDD VVTTGTTVSE ISKLLKQAGV ETVTLVTVCL TVPNAKDNGP VIS
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