Gene CPS_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0106 
Symbol 
ID3520253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand- 
Start bp112533 
End bp113198 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content40% 
IMG OID637282573 
Producthypothetical protein 
Protein accessionYP_266874 
Protein GI71279792 
COG category[S] Function unknown 
COG ID[COG3132] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACAC TTTCCGCAGA ACAATGCCGC ATTATTGGCG TAATGCTTGA AAAAGAAACC 
ACCACGCCTG AGCAATATCC TCTTTCTTTA AATGGTATTA CAACTGGCTG TAATCAAAAG 
AGTAATCGTG ATCCGGTGAT GTCACTATCA GAAAGTGACG TGCAAAACCT AGTTGATGAA 
CTCGTGCAAA TGAATCAATT AATGGTTGAC CAAAAAGCAT CGACTCGCGT TAATAAATAT 
TTTCATCGTT TTTGTGATAC CGAATTTGGT AATTTGAAAT TTACGCCTCA ACAACGCGCC 
GTTATTTGTG TTCTATTTTT AAGAGGCCCG CAAACGCCTG GTGAATTGAG AACGCGTACT 
AATAGATTGG CTGACTTTGC TGACGTGAGT GAGGTTGATA ACACCTTAAC TCAGTTGCAG 
GACTTAAATG GCCTGACCTT GGTCAGAAAA CTAGAACGTG AACCCGGTAA AAGAGAATCT 
CGTTACGTAC ATTTGCTTTC AGATGTTGAT GAAAGCAGTT TCACCCAAGC TGTCACGACT 
CAAACTGAAG TAGTGCTTTC AGAAGAACAA ACATCACTCA CGCAGAGAGT AACCGAGTTA 
GAGCAACAAG TTGCTTCATT AACAGAGCAA ATCAATTGCA TAACTGAATT GTTGAATGAT 
GATTAA
 
Protein sequence
MITLSAEQCR IIGVMLEKET TTPEQYPLSL NGITTGCNQK SNRDPVMSLS ESDVQNLVDE 
LVQMNQLMVD QKASTRVNKY FHRFCDTEFG NLKFTPQQRA VICVLFLRGP QTPGELRTRT 
NRLADFADVS EVDNTLTQLQ DLNGLTLVRK LEREPGKRES RYVHLLSDVD ESSFTQAVTT 
QTEVVLSEEQ TSLTQRVTEL EQQVASLTEQ INCITELLND D