Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0086 |
Symbol | |
ID | 3518413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 89242 |
End bp | 91413 |
Gene Length | 2172 bp |
Protein Length | 723 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637282553 |
Product | prolyl endopeptidase |
Protein accession | YP_266854 |
Protein GI | 71277809 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1505] Serine proteases of the peptidase family S9A |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAAAC AAAGCCTTTT CTTGACCAGT ATCTTGGTCA CTAGCGTATT AGCCGGTTGT ACTGGTAACA GTGTTGAGCA AACATCAGAT AAAGTTGCTG CTGCACAAAA ACAGACACAA AAAATCAGTT ATCCTGTGAC AAAAAAAGGT GACGTGGTTG ATACCTTTTT TGGTACTGAT GTTGCAGACC CATACCGATG GTTAGAAGAT GATCGCAGTG AAGAAACAGG CGCTTGGGTT AAGGCAGAAA ACAAAGTGAC ATTCGATTAC TTGTCACAAA TTCCATACCG TGGACAACTT AAGTCTCGTT TAGCTGAATT ATGGAACTAC GAAAAAGTAG GCGCACCTTT TAAAAAGGGT GATTATTCCT ATTTTTACAA AAATGATGGT CTGCAAAACC AATATGTCGT TTATCGTCAA AAAGAGGGCG GCACTGCTGA ATTGTTTTTA GATCCAAACA CCTTTAGTGA AGATGGCACC ACCTCAATGG GACAGTTAAG CTTCTCAAAA GATGGCTCTA TTGCCGCTTA TGCTATTTCT GAAGGTGGAA GTGATTGGCG TAAAATCATC ATTATTGATG TAGAAACCAA AAAAGTACTA GAGACTCCTC TGATTGATGT TAAATTCTCA GATATTTCTT GGTTTAAAAA TGAAGGGTTT TATTACTCAA GTTATGACAA ACCAGAAGGT AGTGAATTGT CGGCTAAGAC TGACCAACAT AAACTTTATT ACCATGTATT AGGTCAGCCA CAAAAAGAAG ATAAAGTTAT TTTTGGTAAT ACCGCTGAAC AAAAGCGTCG TTATGTTGGT GGTACCGTTA CCGATGATAA TCGCTTCTTA CTTATTTCAG GTGCAATTTC AACGTCAGGT AACGATCTTT ACCTGAAAGA TTTAACCAAA CCAAATAGCC CATTACTCAC CATTACTGAT AACTTTGATG CTGATACCTA CGTCATTGAA AATGAAGGCG ATAAATTATT TTTAGTTACT AACTTAGGTG CACCAAATAA GAAAATAGTC ACGGTAAATG CTAAAGCACC AGCCAGTAAA AACTGGACTG ATTTTATTGC TGAAACAGAT TATGTTTTAA GCGCTTCAAC GGGTGGTGGT TTCTTCTTTA CTGAGTATAT GGTTGATGCC ATTTCTAAAG TTTATCAATA TGATTATCAA GGTAAGCAAG TACGTGAAAT CAACTTGCCA GGTGTTGGTA GTGCTTCTGC CTTAGAAGGC GATAAAGACG AAAGTACTTT ATATTACTCA TTTAGCAACT ACAAAACGCC AGGTACTATC TATAGCTACA ACATAGATAA AGGTAATAGT GACGTTTACC GTAAATCTGG CGCTAAATTC GATAGCGATG CTTATGAATC AAAGCAAGTA TTCTATCCTT CAAAAGATGG CACCAAAGTA CCTATGATCA TTACCTATAA AAAGGGTATT GAGCTTAATG GTAAAAATCC AACTATTTTG TATGGTTACG GCGGCTTCAA TATTAGCTTA ACCCCACGAT TTAGTGTTTC ACGTGCAGTA TGGCTAGAAC AAGGCGGTAT TTATGCTGTT GCTAACTTAC GTGGTGGCGG TGAATACGGT AAAACATGGC ACAAAGCCGG CACTCAATTA GATAAACAAA ATGTTTTTGA TGACTTTATT GCTGCCGGTG AATACTTAAT TAAGCAAGAT TATACTTCTA GCGACTACTT GGCGATTAAT GGCGGTTCTA ACGGTGGTTT ATTAGTAGGT GCTGTTATGA CTCAGCGTCC TGATCTTATG CAAGTTGCCT TACCCGCTGT TGGTGTATTA GATATGCTTA GATACCATAC CTTCACTGCT GGTGCAGGCT GGGCGTACGA CTACGGTACG GCTGAGCAAA GTGAAGAAAT GTTCACTTAC TTAAAAGGTT ATTCACCTGT TCATAATGTT AAAGCCGGTG TAAGTTATCC TGCGACTATG GTCACTACCG GTGATCATGA TGACCGTGTT GTGCCAGCAC ATTCATTTAA GTTTGCTGCT GAATTACAAG CTAAACAAGC AGGTAACGCG CCTACATTAA TTCGTATTGA AACCAATGCA GGTCACGGCG CAGGTACGCC AGTTTCTAAA ACTATTGAAC AGTACGCTGA CATCTATGCC TTTACCTTGT TTAACATGGG TTTTACTGCA TTACCTAAGT AG
|
Protein sequence | MKKQSLFLTS ILVTSVLAGC TGNSVEQTSD KVAAAQKQTQ KISYPVTKKG DVVDTFFGTD VADPYRWLED DRSEETGAWV KAENKVTFDY LSQIPYRGQL KSRLAELWNY EKVGAPFKKG DYSYFYKNDG LQNQYVVYRQ KEGGTAELFL DPNTFSEDGT TSMGQLSFSK DGSIAAYAIS EGGSDWRKII IIDVETKKVL ETPLIDVKFS DISWFKNEGF YYSSYDKPEG SELSAKTDQH KLYYHVLGQP QKEDKVIFGN TAEQKRRYVG GTVTDDNRFL LISGAISTSG NDLYLKDLTK PNSPLLTITD NFDADTYVIE NEGDKLFLVT NLGAPNKKIV TVNAKAPASK NWTDFIAETD YVLSASTGGG FFFTEYMVDA ISKVYQYDYQ GKQVREINLP GVGSASALEG DKDESTLYYS FSNYKTPGTI YSYNIDKGNS DVYRKSGAKF DSDAYESKQV FYPSKDGTKV PMIITYKKGI ELNGKNPTIL YGYGGFNISL TPRFSVSRAV WLEQGGIYAV ANLRGGGEYG KTWHKAGTQL DKQNVFDDFI AAGEYLIKQD YTSSDYLAIN GGSNGGLLVG AVMTQRPDLM QVALPAVGVL DMLRYHTFTA GAGWAYDYGT AEQSEEMFTY LKGYSPVHNV KAGVSYPATM VTTGDHDDRV VPAHSFKFAA ELQAKQAGNA PTLIRIETNA GHGAGTPVSK TIEQYADIYA FTLFNMGFTA LPK
|
| |