Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0083 |
Symbol | recQ |
ID | 3522689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 86632 |
End bp | 88479 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637282550 |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_266851 |
Protein GI | 71282216 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family [TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATTCCT CCGTTGCCAA TGCCCAAACC AGTGCAGAAA TCAGTACAGA ACTGAGTGCA GAAAATAATG CCTTATTACT CGATACCTTA AAGCATTATT TTGGCTATGA GAGCTTTCGT GAGGGACAAG CTAAAATTAT CAATAGCTTG TTGCAAGGGC AGGACTCCTT AGTCTTAATG CCTACCGGTG GTGGTAAATC TTTATGCTAT CAGCTACCCG CGGTACTGTT ACCCGGTGTT ACTGTTGTTG TATCGCCGCT GATTGCCTTA ATGAAAGACC AAGTAGATGG CTTAACTAGG CAAGGGATCT CCGCTGCCTT TATTAATTCA AGTTTGGAAC AAAGCGAAAT CAGTGATATT TTCGCTCGAT TGGGACGAGG TGAAATTAAA TTGCTGTATG TTGCCCCTGA GCGCCTCACT AATTATTACT TCTTACAAAG TTTGAACCAA CTGCCATTGA GCTTATTTGC TATTGATGAA GCACACTGTA TTTCTCAATG GGGTCATGAT TTCAGACCCG CGTACACCAA GCTACAGTGC TTAAAACAAA ATTTTCCCAC AGTGCCCGTT ATGGCGTTAA CTGCAACGGC AGATGTGACT ACTCGTAAAG ATATTTTGAA CCAACTTGCG CTGCCAAATC CTTATATTCA TCTTGATAGT TTTGACCGGC CCAATATTCG TTTTACGCTA GCGCCTAAAT ATAATGGCGA AAAGCAATTG TTGGGTTATA TCAAAAAGAA GGGTGAAGAT AGCGGTATTA TTTATTGTAA CAGCCGCTGG CAAGTAGAAA AACTAGCTAA GTATTTAGCT GCCAGTGGCA TAAACTGCGC TGCTTACCAT GCAGGACTAG AAAACGAAAT TCGTTCTCTA GTACAAGAAG GGTTCACCAA AGATAATATT CAAATAGTGA TCGCTACCGT TGCTTTTGGT TTAGGTATCA ATAAACCTAA TGTGCGTTAT GTGATACATT TTGAGCCACC TCGTACTTTA GAGTCTTATT ATCAAGAGAT TGGCCGTGCG GGTCGTGACG GTTTAAATGC AGAAGCGCTA TTTTTGGTTG ATGATAAAGA TGTCGCGCGT ATTAAAAAAC GTATTAGTGA AGGCGATAAT CCGCAGCGAG TGAATGTTGA AATGCAACGT TTTGCTGCCA TGGATGCCTT TATTGATGCG CAAACGTGTC GTCGGCAGGT GGTACTGAAT TACTTTGCCG AATATACCGA AAAAGGCTGT GGAAATTGCG ATATTTGCTT AGACCCACCA AGTCAGTTTG ATGGCACCAT AGAAGCACAA AAAGTACTGT CATGCGTGTA CCGTGTGGAG CAACAAGGTG ATATTAATCA TGTTATTGCA GTCTTGCGCG GTGAACTCAC TGAAAAAGTT AAGCAGCTAG CGCATGATAA AGTCTCTACT TTTGGTATAG GTAAAGGAAA AACGGTGGGT TACTGGTTCT CAATTATTGG CCAACTAATT CACTTAGGTT ATTTACAGCA AGATATCGAA CAACAATCTA TTTTATGCTT AACACAAGCG TCGGGCGTGG TATTAAAAGC GCAAGAGCCT TTGATGTTAG CAAGCCCGCG TCTGCAAAAA GCCAGTTACT GGCAAGAAAA AAGCCCACAA AAAAGTTATG ACCGTGTGTT ATTTGCAAAA TTACGCGAAC TTCGTAAAGC CATTGCTGAT GGCGAAGATA TCGCACCTTT TATTGTCTTT AATGATGCTA CCTTGTCTGA ACTGGCACGT ATAAAGCCAA AAACATCGCG TGAAATGCTC AGCATTAGTG GTATCGGAGA CGTGAAGTTA TCCCGTTACG GACAACCCTT TCTCGCGTTA ATCAAAGAGC ATAAGTAA
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Protein sequence | MNSSVANAQT SAEISTELSA ENNALLLDTL KHYFGYESFR EGQAKIINSL LQGQDSLVLM PTGGGKSLCY QLPAVLLPGV TVVVSPLIAL MKDQVDGLTR QGISAAFINS SLEQSEISDI FARLGRGEIK LLYVAPERLT NYYFLQSLNQ LPLSLFAIDE AHCISQWGHD FRPAYTKLQC LKQNFPTVPV MALTATADVT TRKDILNQLA LPNPYIHLDS FDRPNIRFTL APKYNGEKQL LGYIKKKGED SGIIYCNSRW QVEKLAKYLA ASGINCAAYH AGLENEIRSL VQEGFTKDNI QIVIATVAFG LGINKPNVRY VIHFEPPRTL ESYYQEIGRA GRDGLNAEAL FLVDDKDVAR IKKRISEGDN PQRVNVEMQR FAAMDAFIDA QTCRRQVVLN YFAEYTEKGC GNCDICLDPP SQFDGTIEAQ KVLSCVYRVE QQGDINHVIA VLRGELTEKV KQLAHDKVST FGIGKGKTVG YWFSIIGQLI HLGYLQQDIE QQSILCLTQA SGVVLKAQEP LMLASPRLQK ASYWQEKSPQ KSYDRVLFAK LRELRKAIAD GEDIAPFIVF NDATLSELAR IKPKTSREML SISGIGDVKL SRYGQPFLAL IKEHK
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