| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0074 |
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| Symbol | hemC |
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| ID | 3518906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 77468 |
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| End bp | 78421 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637282541 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_266842 |
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| Protein GI | 71278494 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACA CTACAGTACG AATTGCCACG CGTAAAAGCG CCCTCGCCTT ATGGCAAGCA
GAATATGTTA AAGCGCAACT TGAGCATTTT CATGACGGTA TTAATGTTGA ATTAGTGCCT
ATGACAACGA AAGGCGACAT CATTTTAGAC ACGCCTTTAG CCAAAGTCGG CGGTAAAGGT
TTATTTGTTA AAGAGCTTGA AGTAGCAATG CTTGAAGACC GTGCTGATAT TGCTGTTCAT
TCAATGAAAG ATGTTCCTGT CGATTTTCCA GAAGGCTTAG GATTAGAAGT CATTTGTCCT
CGTGAAGATC CCCGTGATGC TTTTGTTTCT AATACCATCA AATCATTAAG TGATTTACCA
CAAGGCTCTA TTGTTGGCAC CTCAAGCTTA CGCCGTCAGT GTCAATTAAA AGCAAGCCGC
CCTGATTTAG ATATTCGTGA TTTACGTGGC AATGTAAATA CCCGCCTAAG AAAATTAGAT
GAAGGTCAGT ACGACGCTAT TATATTAGCC GCTGCAGGCC TAATTCGCTT AGAAATGAGC
GAGCGTATTG CACAGTTTAT CGAACCAGAA GAAATGCTTC CTGCAAATGG CCAAGGCGCT
GTTGGCATTG AATGTCGTAA TGATGATGCG ACAATTAAAG CCTTATTAGC ACCATTAGAA
TGTGCTACCA CCCGTATTCG TGTTCTTGCA GAACGTGCAA TGAATAGAGC ATTACAAGGC
GGTTGCCAGG TTCCTATCGG TAGCTATGGT GTTATTTCTG CTGATGGTAA AAATATCCAC
TTACGTGGCT TAGTTGGCTC TGTCGATGGT AGTGAAATGA TAGAAAGTGA AATCACCGGC
CCTGTTGAAG AAGGTGAAGC GCTCGGCAAT AAACTCGCGC AAGAGTTACT AAGCCGAGGT
GCAGATAAAA TTTTACAGCA AGTTTATTCA GAAAATGATA TCAAAAACAG CTAA
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| Protein sequence | MNNTTVRIAT RKSALALWQA EYVKAQLEHF HDGINVELVP MTTKGDIILD TPLAKVGGKG
LFVKELEVAM LEDRADIAVH SMKDVPVDFP EGLGLEVICP REDPRDAFVS NTIKSLSDLP
QGSIVGTSSL RRQCQLKASR PDLDIRDLRG NVNTRLRKLD EGQYDAIILA AAGLIRLEMS
ERIAQFIEPE EMLPANGQGA VGIECRNDDA TIKALLAPLE CATTRIRVLA ERAMNRALQG
GCQVPIGSYG VISADGKNIH LRGLVGSVDG SEMIESEITG PVEEGEALGN KLAQELLSRG
ADKILQQVYS ENDIKNS
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