Gene CPS_0063 details

Gene Information

• Locus tag: CPS_0063
• Symbol: atpC
• ID: 3518862
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 63009
• End bp: 63431
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637282530
• Product: ATP synthase F1, epsilon subunit
• Protein accession: YP_266831
• Protein GI: 71278528
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATTAT TAACTGTTAA TCTTAATGTA GTAAGTGCAG AAGAAAGCTT GTTTTCTGGT 
AGCATTAAAT CATTACAGAT CACAGGTAGT GAAGGTGAAT TAGGCATTAT GCCTGGTCAC 
GCACCTTTAC TGACCTCACT AAAACCTGGT ATGGCACTTA TCACTAAAGC AGATGGCACT 
GAAGAAGTTA TCTATCTTTC AGGTGGTATG TTAGAAGTTC AACCAAATAA CGTTACCGTG 
TTAGCTGATG TAGCTACGCG TGCTGCGGAC TTGGATGAAG AAGCGGCTCT TGCTGCTAAA 
CAACGTGCAG AAGACAACAT GAACGCCCAT GGCGGCGATG TTGACTATGC TGCTGTTGCT 
GCTGAATTAG CTCGTGCAGT AGCGCAATTA CGCGTTATTC AAGCGACTAG CAAGCATAGC 
TAA 

 

Protein sequence

MALLTVNLNV VSAEESLFSG SIKSLQITGS EGELGIMPGH APLLTSLKPG MALITKADGT 
EEVIYLSGGM LEVQPNNVTV LADVATRAAD LDEEAALAAK QRAEDNMNAH GGDVDYAAVA 
AELARAVAQL RVIQATSKHS