Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0062 |
Symbol | atpD |
ID | 3520888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 61562 |
End bp | 62947 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637282529 |
Product | F0F1 ATP synthase subunit beta |
Protein accession | YP_266830 |
Protein GI | 71280422 |
COG category | [C] Energy production and conversion |
COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTACAG GTAAAGTCGT CCAAATAATT GGCGCAGTTG TGGATGTAGA ATTTCCACAA GATGCCGTAC CTCAGGTATA TGACGCATTA AAGATAACTG AAGGTGACCT TGAAGGTTTA GTACTTGAAG TGCAACAGCA GCTTGGTGGC GGCGTTGTGC GTACTATCGC AATGGGTACA TCTGACGGTT TGCGTCGTGG TCTGAATGTA GTAAATACAG GTCAAGGAAT CCAAGTACCA GTTGGTGTTG AGACTTTAGG TCGCATCATG AACGTACTGG GTGAGCCAAT TGATGAAGCT GGCCCTATCG GCGAAAAAGA CCGTTGGTCT ATTCACCGTG AAGCACCTGC TTATGCTGAA CAATCAATGT CTAACGAATT GTTAGAAACT GGTATCAAAG TAATCGATTT AGTTTGTCCA TTCGCTAAGG GTGGTAAAGT TGGTCTTTTC GGTGGTGCTG GTGTTGGTAA AACAGTAAAC ATGATGGAAC TTATCCGTAA CATCGCAATC GAGCACAGTG GTTACTCAGT ATTTGCTGGT GTTGGTGAGC GTACACGTGA AGGTAACGAT TTCTATCACG AAATGAATGA TTCTAATGTA CTTGATAAAG TATCATTAGT TTACGGCCAA ATGAACGAGC CTCCAGGAAA CCGTTTACGT GTTGCCTTTA CTGGTTTAAC TATGGCTGAG AAATTCCGTG ACGAAGGTCG TGACGTATTA TTCTTTGTTG ATAATATCTA TCGTTATACT CTTGCGGGTA CTGAAGTTTC TGCACTTCTT GGACGTATGC CATCAGCGGT TGGTTATCAA CCAACACTTG CTGAAGAAAT GGGTGTATTA CAAGAACGTA TTACTTCAAC TAACAAAGGT TCAATCACTT CAATCCAAGC GGTATACGTA CCAGCAGATG ATTTAACTGA CCCTAGCCCT GCAACTACTT TTGCTCACTT AGATGCAACT GTTGTATTAA GTCGTGATAT TGCTTCGCAA GGTATTTATC CTGCGATTGA CCCACTAGAT TCATCTTCAC GTCAACTAGA TCCATTAGTA GTTGGTACTG AACATTATGA AACTGCTCGT GGCGTTCAAA CAGTATTACA ACGTTACAAA GAACTTAAAG ATATCATCGC CATCTTAGGT ATGGATGAGT TATCTGAAGA AGATAAGCAA ACTGTATCTC GTGCACGTAA GATTCAGCGT TACTTATCTC AGCCGTTCTT CGTTGCTGAA GTATTTACTG GTTCTCCTGG TAAATATGTA TCATTAAAAG ACACCATTGC TGGCTTTAAA GGCATTTTAG CTGGTGAATA CGATGATATG CCTGAGCAAG CGTTCTACAT GGTTGGTGGT ATTGAAGAAG CCATCGAGAA AGCGAACAAG ATGTAA
|
Protein sequence | MSTGKVVQII GAVVDVEFPQ DAVPQVYDAL KITEGDLEGL VLEVQQQLGG GVVRTIAMGT SDGLRRGLNV VNTGQGIQVP VGVETLGRIM NVLGEPIDEA GPIGEKDRWS IHREAPAYAE QSMSNELLET GIKVIDLVCP FAKGGKVGLF GGAGVGKTVN MMELIRNIAI EHSGYSVFAG VGERTREGND FYHEMNDSNV LDKVSLVYGQ MNEPPGNRLR VAFTGLTMAE KFRDEGRDVL FFVDNIYRYT LAGTEVSALL GRMPSAVGYQ PTLAEEMGVL QERITSTNKG SITSIQAVYV PADDLTDPSP ATTFAHLDAT VVLSRDIASQ GIYPAIDPLD SSSRQLDPLV VGTEHYETAR GVQTVLQRYK ELKDIIAILG MDELSEEDKQ TVSRARKIQR YLSQPFFVAE VFTGSPGKYV SLKDTIAGFK GILAGEYDDM PEQAFYMVGG IEEAIEKANK M
|
| |