| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0015 |
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| Symbol | trkH |
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| ID | 3521693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 16242 |
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| End bp | 17693 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637282482 |
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| Product | Trk system potassium uptake protein TrkH |
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| Protein accession | YP_266797 |
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| Protein GI | 71281222 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCAATATA AAAATATTAT CCGAATTCTA GGCTTGTTGG TAGGGTTACT TAGTGTGACT
ATGCTGCCTC CAGCATTAAT CTCATTAATC TACCGCGATG GTGGTGGTTT ACCTTTTATT
CTGGCTTTTT TATGGTGTAT CTGCACAGGC TTTTTGGCTT GGTACCCTCA TCGCTTTGAA
AAAACGGATC TTAAAGCCAG AGAAGGTTTT TTAATTGTTG TGCTCTTTTG GTTAGTACTG
GCCAGCTTTT CTGCTATTCC TCTGATGTTA TTAGAAGAAC CCAACCTATC TACCGCTGAT
GCCTTTTTTG AATCCTTTTC AGGATTAACC ACGACAGGGG CAACTATTTT AAATCATATT
GATGATTTAC CCCACGCAGT CTTATGGTAT CGCCAGCAAT TACAGTGGTT AGGTGGTATG
GGTATTATTG TTTTAGCTGT TGCGGTATTA CCGATGCTTG GTATTGGTGG TATGCAATTA
TATCGTGCTG AAACACCTGG CCCAGTGAAA GACTCAAAAA TGACGCCACG GATTGCCGAT
ACCGCAAAAC ATTTATGGTA CATTTATTTA GGATTAACTA TTGCGTGTGC TTTAGCATAC
TGGCTCGCAG GTATGTCGGG TTTTGATGCT ATTTGCCATG CCTTTTCTAC GATTGCAATT
GGTGGTTTTT CTACCCATGA TGCTAGTATG GGCTACTTTA ATAGCCCAAC AATTAACTTA
GTTTGTGTCA CCTTTCTATT AATTGCTGGG GTTAATTTTG CCTTGCACTA TGCCGCTGTG
CAGAGTAGAT CGGTTAGGAG TTACTTCTTT GACCCTGAGT TTAAAGTCTT TATTGGTATC
CAAATTGTAC TGACTGTAAT TTGCTTTACC GTACTATTAG CTACGGGTAC TTATCAAGAT
GTCGACCAAG CACTCGATCA AGCACTATTC CAATCGGTTT CAATTAGTAC TACCGCAGGG
TTTGCAACAA CATCTTTTGC TGATTGGCCC ACGCTTTTGC CTATGTTACT TATTTTTTCT
AGTTTTATTG GTGGTTGTGC AGGTAGTACT GGTGGTGGTA TGAAGGTAGT ACGGGTAGTG
TTACTTTATT TACAAGGTCT TCGAGAGTTA AATAAACTGG TACATCCTCG AGCTATTTTT
AGTATTAAAT TAGGTCGAAA AGTTTTACCT GACCGTATTG TTGAGGCCGT ATGGGGTTTC
TTCTCCGCTT ACGCTGCGGT GTTTGTTATT TGTATGTTAC TGCTACTGGC AGCAGGTATG
GATGACATCA CAGCCTTTAC AGCCGTTGCG GCTTGTATCA ATAACCTTGG ACCAGGGTTA
GGGGAGGTTG CTGCTAACTT TTCTTCGATT AATGATATGA GCAAGTGGGT ATTAATCATG
GCCATGTTGT TTGGTCGTTT AGAGATATTT ACGCTGCTAG TTCTGTTTAC TCCTGCCTTC
TGGCGCTCAT AA
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| Protein sequence | MQYKNIIRIL GLLVGLLSVT MLPPALISLI YRDGGGLPFI LAFLWCICTG FLAWYPHRFE
KTDLKAREGF LIVVLFWLVL ASFSAIPLML LEEPNLSTAD AFFESFSGLT TTGATILNHI
DDLPHAVLWY RQQLQWLGGM GIIVLAVAVL PMLGIGGMQL YRAETPGPVK DSKMTPRIAD
TAKHLWYIYL GLTIACALAY WLAGMSGFDA ICHAFSTIAI GGFSTHDASM GYFNSPTINL
VCVTFLLIAG VNFALHYAAV QSRSVRSYFF DPEFKVFIGI QIVLTVICFT VLLATGTYQD
VDQALDQALF QSVSISTTAG FATTSFADWP TLLPMLLIFS SFIGGCAGST GGGMKVVRVV
LLYLQGLREL NKLVHPRAIF SIKLGRKVLP DRIVEAVWGF FSAYAAVFVI CMLLLLAAGM
DDITAFTAVA ACINNLGPGL GEVAANFSSI NDMSKWVLIM AMLFGRLEIF TLLVLFTPAF
WRS
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