| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_C0030 |
|---|
| Symbol | |
|---|
| ID | 4206668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008265 |
|---|
| Strand | - |
|---|
| Start bp | 23261 |
|---|
| End bp | 23536 |
|---|
| Gene Length | 276 bp |
|---|
| Protein Length | 91 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 26% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_699958 |
|---|
| Protein GI | 110804058 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 0.0000114091 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGA AATATTTAGA ACACATAGTA AGCTTAGAAG AATTAAAAGC AAGTCATTAC
AGAGTATTAC TTTTATTAAA TATAGACAAG CTTACTCAAA CAGATATTGC AAGAAAGCTA
GATATAAAAA GACAGAATGT AAATAAAATA TTTAAGACCT TAATAGAGTA TGGACTAATA
GAAGAGGTTG AAACTGTAGG TAAAAGTAAA TTTTTTAAAG CAGTAGATCC TAAAAAAATT
AATCTTAACA TACCAGGGCA ATTAAAGTTT GTATAG
|
|---|
| Protein sequence | MEKKYLEHIV SLEELKASHY RVLLLLNIDK LTQTDIARKL DIKRQNVNKI FKTLIEYGLI
EEVETVGKSK FFKAVDPKKI NLNIPGQLKF V
|
|---|
| |