Gene CPR_A0004 details

Gene Information

• Locus tag: CPR_A0004
• Symbol: uviA
• ID: 4206634
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008263
• Strand: +
• Start bp: 3983
• End bp: 4549
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 21%
• IMG OID: 642567226
• Product: uviA protein
• Protein accession: YP_699913
• Protein GI: 110804004
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 575
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGAAT TATACGAAAA GATAAAGTTA TGTAAATTAG GAAACAAAGA GGCTTTACAA 
GAAGTTGTTA ATATATTTGA GAAAACTATA ATGAAAGAAT TATTTAAATT TAAAAAAGAA 
AATAGTACTA TTTTTATGAA TGAGTATGAC TTTCAAGATA AAAAGAGTGA AATTACATTA 
AATGTTTTAA ATGCAATAAA AAATATGCCA ATTGAAAGTT TTGAATATAA AACTGACTAT 
TCTGTAAAAA AATATATAAG GAAAACAATT TTAAATAAAT TGAATGAGAT TAAAACAAAA 
GAATTTAATA AGACAGAAAA TGAATATAAG TATGAGTTCG ATTTTAGCTT TTTTAAGTCT 
AGTGATTTTA ATGAGCCTAA TACAGATATA TTTGTACATG ATTTAATAGA CAAGCTTTCT 
GAAAAAGAAA GAAAAGTAAT TAAGTATAAA TACATATATG GAAAAAGTGA TGTTGAAATA 
GGAGAATTGC TTAATTGTTC TAGACAATAT GTAAATAAGA TTAAGAATAG GGCATTAAAA 
AATATAAAGA AATTTTTAGA TGATTAA 

 

Protein sequence

MQELYEKIKL CKLGNKEALQ EVVNIFEKTI MKELFKFKKE NSTIFMNEYD FQDKKSEITL 
NVLNAIKNMP IESFEYKTDY SVKKYIRKTI LNKLNEIKTK EFNKTENEYK YEFDFSFFKS 
SDFNEPNTDI FVHDLIDKLS EKERKVIKYK YIYGKSDVEI GELLNCSRQY VNKIKNRALK 
NIKKFLDD