Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2658 |
Symbol | |
ID | 4206523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2882300 |
End bp | 2883160 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 642567206 |
Product | mechanosensitive ion channel family protein |
Protein accession | YP_699893 |
Protein GI | 110801831 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0115442 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTATTAA GTAGTTTGCT TGGAATTAAT TTTGAATTTG ACCACATTAA TCTTGGAAAA ATAAGTATTT CTTTATCTAC TATTGATTTT TTATTAAAAA AATTTATAAC AATATGTATA ATAGTTATGT TCATGACACT AGTAATTAAT ATAGGAAATA GATTAATAGA TAAAGCTGTT CAAAAACAAT TAGATACAAA TTTTAAGTTT TCTTTAGATA AAGGAAAAGC GTATACTTTA GGAACTTTAT TAAAAAGTAT TTTAATGTAT TCTGTATATT TTATAGGTAT AACAACTATA CTATCTATTA TATTTGGAAA TATATCTTGG GCTTTTGCCT CTGTAGGAGG AGTAGCCGTA GGTTTAGGAG CTCAAAGTTT TGTCAAAGAT GTAATAAATG GAATATTTAT ACTTTTTGAT AACCAATACA ATGTTGGGGA TTATGTAACC ATAGAAGGGG TAAGTGGAAT TGTAGAGGTA ATAGGTCTTA GGACAACTGA GCTTAGAGAT CAAGATGGTT CTCTTCATAT TATTCCAAAT GGAATGATAA GAATAGTAAC AAATAATTGT AGAGGTGATA TGAGAGTTCA GATTGATATT GGAATTTCAT ATAGTGATGA TATAAATAAA GTAATAAACA CTATAAACTC AGTTTGTGAT ATATATAATA AAGAAAATAA TGATATAACA GAACCATTAA AGGTTTGGGG AGTTACAGAC CTAACAAGTT CTAGTGTTAA TCTCAGAATT TGTGGAAAAG TAAAATCAAT GAAACTTTGG GAAACAGAAG TAGAGTTAAG AAAGAGAATA AAAATGACTC TTGATAAAAA GAAATATATG AAAGAAATAA TTACAGGTTA A
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Protein sequence | MLLSSLLGIN FEFDHINLGK ISISLSTIDF LLKKFITICI IVMFMTLVIN IGNRLIDKAV QKQLDTNFKF SLDKGKAYTL GTLLKSILMY SVYFIGITTI LSIIFGNISW AFASVGGVAV GLGAQSFVKD VINGIFILFD NQYNVGDYVT IEGVSGIVEV IGLRTTELRD QDGSLHIIPN GMIRIVTNNC RGDMRVQIDI GISYSDDINK VINTINSVCD IYNKENNDIT EPLKVWGVTD LTSSSVNLRI CGKVKSMKLW ETEVELRKRI KMTLDKKKYM KEIITG
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