Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2644 |
Symbol | |
ID | 4206437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 2868794 |
End bp | 2869966 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642567192 |
Product | sugar isomerase domain-containing protein |
Protein accession | YP_699879 |
Protein GI | 110802658 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2222] Predicted phosphosugar isomerases |
TIGRFAM ID | [TIGR02815] putative sugar isomerase, AgaS family |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA TTTTTGGATT TACTAAAGAA GAATTATCCA GCTTAAAAGC CACTTATACA GCTAATGAAA TATATCAACA ACCAGAATTA TGGAAAGAGA CTTTAAACAT AGTAGAAAAT AATAAAGAAG CTATAAATAA ATTCTTAGAA AAAAATTTAA ATAAAGACAA TGTAAAAATA ATCTTAACTG GAGCAGGAAC ATCTGCCTAT GTTGGAGATA CCATATATCT TTATTTGGCT AAAAAGTTAG GTAAAAGAGT TGAAGCTATA GCAACTACTG ACTTCGTTTC AAATCCAGAT GAATATATAG ATGAAAATGC AAATACCCTC TTAGTTTCTT ATGCTCGTTC TGGTAATAGC CCAGAAAGTG TTGGAACTTA TGATTTATTT GAAAAGAAAG TTAAAAATCT AGCACACATA GTTGTTACTT GTAATAAAGA GGGTGAGCTT GCTAAGAAGT CTCAAGAAAA AGAAGGAAAC TTAGTTTTAA TAATGCCAGA AAAATCAAAT GATAAGAGTT TTGCTATGAC AAGCTCCTTT ACTTGTATGA CATTAGCTAC TCTACTTTTA TTTGATATAG CTAATCTTAA AAAAAATAAA AAAATCGTTG AAGAATTAGC TACTAAAGGA CAAGCTTCTC TTGATAATCA ATGGAAAGAT GCAAAATCAA TTTCAGATTT AGGAGCAGAA AGAATTGTTT ATGTGGGTTC TGGCGCCTTA AATGGTCTTT GCCATGAAAT GGCTCTTAAA AATTTAGAAT TAACTTCTGG TAAACAAGTT ACTGTTTGTG AATCAATCTT AGGCTTTAGA CATGGTCCTA AGTCAATAAT AAATAATAAC ACTTTAGTTA TATTCTTATG CTCTACAAAT GATTATACAG CTCTTTATGA TTATGACTTA ATAAAAGAAG TTTATAATGA TGAAGGTACT CAAAAGGTTG CTGTTTTAAA TTATTTTGAC AGAGAAAATC TTAAGGAAAT TTCTCATAAA TATATAACAG CTAATGGATC TAAACTAGAT GATACATTTA TAGCATTTAA TTATATAATA TTTGGTCAAA TGATTTCTTT CTTTAACTCT TTAAGACTTG GAATTTCTCC TGATAATCCA AGACCTGATG GAACAGTTAA TAGAGTTGTT CAAGGGGTTA TAATTCACGA ATATAATAAT TAA
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Protein sequence | MNKIFGFTKE ELSSLKATYT ANEIYQQPEL WKETLNIVEN NKEAINKFLE KNLNKDNVKI ILTGAGTSAY VGDTIYLYLA KKLGKRVEAI ATTDFVSNPD EYIDENANTL LVSYARSGNS PESVGTYDLF EKKVKNLAHI VVTCNKEGEL AKKSQEKEGN LVLIMPEKSN DKSFAMTSSF TCMTLATLLL FDIANLKKNK KIVEELATKG QASLDNQWKD AKSISDLGAE RIVYVGSGAL NGLCHEMALK NLELTSGKQV TVCESILGFR HGPKSIINNN TLVIFLCSTN DYTALYDYDL IKEVYNDEGT QKVAVLNYFD RENLKEISHK YITANGSKLD DTFIAFNYII FGQMISFFNS LRLGISPDNP RPDGTVNRVV QGVIIHEYNN
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