Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2610 |
Symbol | |
ID | 4204251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2846230 |
End bp | 2846709 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642567160 |
Product | rRNA large subunit methyltransferase |
Protein accession | YP_699857 |
Protein GI | 110803010 |
COG category | [S] Function unknown |
COG ID | [COG1576] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATAA CAGTTATTTC AGTAGGGAAA CTAAAGGAAA AGTATTTAAA GCAAGCTATA GATGAGTATT CAAAAAGATT AAGTAGATAT TGTAAATTAG AAATAATAGA ACTTCCTGAT GAGAAAACAC CAGATAATGC TTCAGAAAAA GAGGAGCTTC AAATAAAAGA AAAAGAAGGT AAGTTAATAC TTTCAAAAAT AAAGGATAAT ATGCATGTAA TTGCTATGGA TTTAAAAGGT AATGAAATAA CTTCTGAGAA ATTTTCAAAG TATATAGAGA ATTGTGGAGT TATGGGAAAT TCAAATATTA CCTTTGTAAT TGGAGGAAGC CTTGGTCTAT CACAAGAAGT AATAAAAAGA GCTGATTACA AATTATGCTT TTCAAAAATG ACATTTCCAC ATCAATTATT TAGAGTAATG TTACTAGAAC AAGTTTATAG AGCCTTTAGA ATAATGAAGA ACGAACCGTA TCATAAATAA
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Protein sequence | MNITVISVGK LKEKYLKQAI DEYSKRLSRY CKLEIIELPD EKTPDNASEK EELQIKEKEG KLILSKIKDN MHVIAMDLKG NEITSEKFSK YIENCGVMGN SNITFVIGGS LGLSQEVIKR ADYKLCFSKM TFPHQLFRVM LLEQVYRAFR IMKNEPYHK
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