Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2585 |
Symbol | |
ID | 4204090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2814915 |
End bp | 2815688 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642567135 |
Product | short chain dehydrogenase/reductase family oxidoreductase |
Protein accession | YP_699832 |
Protein GI | 110801498 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAA CAGTTTTAAT AACAGGGGCT ACTAGTGGAA TTGGATATGA ATTTTCAAAA ATATTTATGG AAAACAATTA TGATGTAATA TTAGTAGGAA GAAATTTAGA AAAATTAATG GAATTAGAAG ATTTTTCGAA GAAAAAATGT GTAATGGCTT ACATATATAA ATTTGATTTG AGTTTAAGTG AAAACATAGA TTTTTTATAT AAAAAAATTA AAACTGAAGT AGGAAAAGTA GATATATTAA TAAATAATGC TGGTATAGGA TTTAATGGAG AATTTAATGA AATAGATTGG CAAAAGCAAT TAGATGTAAT AAATGTAAAT ATTATAAGTT TAACCAAATT AACTAAGCTT ATTTTAAAAG ATATGATAAA TGAAAAGGAA GGGAAAATCT TAAATGTTGC CTCTACTGGG GCCTATCAAC CAGGTCCATT AATTTTAGTT TATTATGCAA GTAAAGCATA TGTTTTATCG TTTTCTGAGG CTTTAAGAGA AGAGGTTAAA GATAAGGGAA TTAATGTGGT TACTCTTTGC CCAGGAGCTA CTAAGACGAA TTTTTCTAAG AGAGCTGGAA AGGGAGATTT AGATGTGGCA ATGAGTGCAG AAAAAGTGGC TCAGTGTGGC TATAAGGCTT TGATAAACAA TAAGGCAATA TGTATTCCTG GGATTATGAA TAAGGTATTA GTATTTTTAT CTAAAGTGTC TCCCACAACT TTAAATGCAA AGATAGTAAA GAAAATACAA AATAAAGTTA TAAGTAAAAA ATAA
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Protein sequence | MKKTVLITGA TSGIGYEFSK IFMENNYDVI LVGRNLEKLM ELEDFSKKKC VMAYIYKFDL SLSENIDFLY KKIKTEVGKV DILINNAGIG FNGEFNEIDW QKQLDVINVN IISLTKLTKL ILKDMINEKE GKILNVASTG AYQPGPLILV YYASKAYVLS FSEALREEVK DKGINVVTLC PGATKTNFSK RAGKGDLDVA MSAEKVAQCG YKALINNKAI CIPGIMNKVL VFLSKVSPTT LNAKIVKKIQ NKVISKK
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