Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2536 |
Symbol | |
ID | 4205988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2757378 |
End bp | 2759093 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642567086 |
Product | Na(+)/H(+) antiporter family protein |
Protein accession | YP_699783 |
Protein GI | 110803932 |
COG category | [C] Energy production and conversion |
COG ID | [COG1757] Na+/H+ antiporter |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAAACA AAACTAGATT TAAAGTTTTT CTAACGGTTT TTGCAATGAC AATGTTATGC TCAACCTTAG TCTTTGCTGC TGAAGATGCT GCGGCGGTAA ACTCAGCTAA GTTTGGAATG TGGACAGTGC TGCCACCATT AGTTTCAATT GTATTAGCTT TTTTAACTAA GAATGTTGTA GTTTCTTTAT TCATAGGAAC AATTACAGGA TGTATAATGC TTCAATTAAA TGGATTTAAT ATAATTACAG CGTTAACTCA AGGATTTATT GATTTTACTT ATAGAGCTTT AAATTCCTTA GCTGATCCTT GGAATGCAGG GATAATTCTT CAGGTTTTAG TTATTGGAGG AGTGATTCAT TTAGTAGCTA AAATGGGAGG AGCAAAGGCA ATAGCTGAGG CTTTAGCAAG AAAGGCTAAG ACTGTTAAGA GTGCACAACT TACCACTTGG CTTTTAGGCT TAGCAGTTTT CTTTGATGAT TATGCTAACT CATTAATTGT AGGACCAATA ATGAGACCAG TTACAGATAA ATTAGGAGTT TCAAGGGAAA AATTAGCCTT TATTATAGAT GCAACGGCAG CTCCAATTGC AGGGTTAGCA ATAATATCAA CTTGGATAGG CTTAGAGGTT GGATTAATTG GAGATGCTTT AAAAAGTGTA GGAATACAAG CTGATGGTTT TGGAGTATTT TTAGAAACAA TACCATATAG ATTTTATAAT ATATTAATTT TAGCTTTTGT TGTTATATCA GCAATAACTT TAAGAGAGTT TGGACCAATG CTTAAAGCTG AGAGAAGAGC TAGAAGAGGA GAAGTTTTAT CTACTACAGA AATTTCATCT GATAGTGAAG ATTTAGAACC TATAGAAGGA ATTAAATTAA GTGTTTGGAA TGCAATAATT CCAATTGGAG TTTTAATAGT ATCATCTTTA ATAGGATTTT ATTATAGTGG ATGGGTAACT ATAATGGGTG GAGAAGATTT AGCAATAATA GAGCTTATGA ACAATACACC TTTTAGTTTT GCTGGAATAC AAGCAGCATT CTCAAATGCA GATGCTTCCG TAGTTTTATT CCAATCAGCT TTATTAGCAA CTATAGTAGC TCTTATATTA GGAGTTTCTA GAAAAATCTT TACTATTTCA GAAGGAATAG GAATTTGGAT TGAAGGAATG AAAGGACTTT TAATAACAGG AGTAATTCTT ATATTAGCTT GGTCTTTAAG TTCTGTAATT AAAGAATTAG GAACTGCTTC TTATTTAGTA GGAGTATTAT CAGATGCAAT ACCAGCATTT TTATTACCAG CAATAATATT TATTTTAGGT TCAATAATAG CCTTTGCTAC AGGTACAGCT TATGGAACAA TGGGAATATT AATGCCACTT GCAATTCCAT TAGCCTTTGC AATAAATCCA GAATGGAATT TTGTTATAGT AAGCACATCA GCAGTATTAA CAGGTGCTAT CTTTGGAGAT CATTGTTCAC CTATTTCTGA TACCACAATA CTTTCCTCAA CAGGTGCAGG ATGCGATCAT ATAGAACATG TTAGAACTCA AATATGGTAC GCAGTATTTG TAGGAATAGT AACTGTATTA TTTGGATATA TTCCAGCTGG TTTAGGATTA AGTATTTTCA TAGTGTTACC TTTATCCTTG GTAGCTTTAT TCATATTAAC AATGATATTT GGTAAAAAAG TAGATGACAA AGTAGTTAGC AATTAA
|
Protein sequence | MRNKTRFKVF LTVFAMTMLC STLVFAAEDA AAVNSAKFGM WTVLPPLVSI VLAFLTKNVV VSLFIGTITG CIMLQLNGFN IITALTQGFI DFTYRALNSL ADPWNAGIIL QVLVIGGVIH LVAKMGGAKA IAEALARKAK TVKSAQLTTW LLGLAVFFDD YANSLIVGPI MRPVTDKLGV SREKLAFIID ATAAPIAGLA IISTWIGLEV GLIGDALKSV GIQADGFGVF LETIPYRFYN ILILAFVVIS AITLREFGPM LKAERRARRG EVLSTTEISS DSEDLEPIEG IKLSVWNAII PIGVLIVSSL IGFYYSGWVT IMGGEDLAII ELMNNTPFSF AGIQAAFSNA DASVVLFQSA LLATIVALIL GVSRKIFTIS EGIGIWIEGM KGLLITGVIL ILAWSLSSVI KELGTASYLV GVLSDAIPAF LLPAIIFILG SIIAFATGTA YGTMGILMPL AIPLAFAINP EWNFVIVSTS AVLTGAIFGD HCSPISDTTI LSSTGAGCDH IEHVRTQIWY AVFVGIVTVL FGYIPAGLGL SIFIVLPLSL VALFILTMIF GKKVDDKVVS N
|
| |