Gene CPR_2529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_2529 
Symbol 
ID4204892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2748814 
End bp2749584 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content29% 
IMG OID642567079 
ProductTatD family hydrolase 
Protein accessionYP_699776 
Protein GI110801941 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTATA AAATATTTGA TACACATGCA CATTATGACT CAGATAGTTT TGATGAAGAT 
AGAGAAAATG TAATAAAAGA ACTAAAAGAA AATGGAGTTA TTGGGGTTTT AAATTGTGGA
TCTGATCTTT ATGGATTAAG AAAATCAGTT GAACTTGCAA AAGAGTTTGA TATGTTTTAT
GCCGCAGTTG GTATACATCC AGAAAATGCA GATGAATTTA ATGAGGATGT TGTAAAAGAA
ATAAAAGAAT TTGTTAAGAA TGAAAAGGTT AAAGCTATTG GAGAAATAGG ACTAGATTAT
TATTGGGAAG AAAATCCTCC AAGAGAAGTT CAAAAAGAAG TTTTTAGAGC ACAAATGAAA
TTGGCTGATG AATTAAATTT ACCAGTTGTT ATACATGATA GAGATGCTCA TAAAGACACT
TTAGAAATTA TGAAGGAGTT TCCACATGTA ATTGGAGTAG TACATTGTTT TTCAGGTTCA
GTTGAATTTG CAAAAGAGTG CATTAAATTA GGATATTACA TTGGATTTAC AGGAGTTTTA
ACATTTAAAA ATGCTAAAAA ATTAGTAGAT GTTTGTAGAG AAATACCTGC TGAAAGAATG
TTAGTTGAGA CTGACTGCCC TTTTATGGCA CCAGTTCCTT TTAGGGGGAA AAGAAACAAG
TCAGATTATA TTGAATATAT CATAGATAAA ATGAGTGAAA TAAGAGGAAT TTCAGGGGAA
GAAATGAATG AAGTCTTATT AAACAATAAA AAAAGATTAT TCAAAATTTA A
 
Protein sequence
MKYKIFDTHA HYDSDSFDED RENVIKELKE NGVIGVLNCG SDLYGLRKSV ELAKEFDMFY 
AAVGIHPENA DEFNEDVVKE IKEFVKNEKV KAIGEIGLDY YWEENPPREV QKEVFRAQMK
LADELNLPVV IHDRDAHKDT LEIMKEFPHV IGVVHCFSGS VEFAKECIKL GYYIGFTGVL
TFKNAKKLVD VCREIPAERM LVETDCPFMA PVPFRGKRNK SDYIEYIIDK MSEIRGISGE
EMNEVLLNNK KRLFKI