Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2465 |
Symbol | glyS |
ID | 4206162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2683159 |
End bp | 2684562 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642567015 |
Product | glycyl-tRNA synthetase |
Protein accession | YP_699720 |
Protein GI | 110803756 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0423] Glycyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00389] glycyl-tRNA synthetase, dimeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGTAG AAAAAACTAT GGATAAAATA GTAGCCTTAT GTAAAAACAG AGGATTTATA TTCCCAGGTT CAGAAATATA CGGTGGACTT GCAAACTCAT GGGATTACGG CCCACTAGGA GTTGAATTCA AAAATAACGT AAAAAGAGCT TGGTGGAAAA AGTTTGTTCA AGAGAGCAAA TATAATGTTG GATTAGATTC AGCTATATTA ATGAATAGAG AAGTTTGGGT TGCATCAGGT CACGTTGGTG GATTCTCAGA TCCTCTAATG GATTGTAAAG AATGTAAAGC TAGATTCAGA GCAGATAAAT TAGTTGAAGA TCATATGACT GCAAACGGAG CAGAAGTTGC TACAGCTGAT GGATGGAGCA ATGAAGAGTT AATGGACTAC ATAACTAAGA ATAATATAGT TTGTCCTAAA TGTGGAAAAT TAAACTACAC AGATATAAGA AAGTTCAACT TAATGTTTAA AACTTTCCAA GGAATAACTG AAGATAGTAA AAACGAAGTA TATTTAAGAC CAGAAACTGC TCAAGGTATA TTCGTAAACT TTAAATCAGT ACAAAGAACT ACAAGAAAGA AAGTACCATT TGGTATAGCT CAAATTGGTA AGTCTTTCAG AAACGAAATA ACTCCAGGTA ACTTCACTTT CAGAACTAGA GAGTTCGAAC AAATGGAGCT TGAGTTCTTC TGTAAACCAG GAACTGATTT AGAATGGTTC AACTTCTGGA AAGATAGTTG TTGGAACTTC CTATTAAACT TAGGAATGAA AGAAGAAAAC ATAAGAATGA GAGATCATGG AGAAGAAGAA TTAAGCTTCT ACTCAAATGC TACTTCAGAT ATAGAATACT TATTCCCATT TGGATGGGGA GAACTTTGGG GAATAGCTGA TAGAACAGAC TATGACTTAA ATAAGCATGC TGAACACTCA GGTCAAGACA TGACTTACTT AGACCCAACA ACAAATGAAA AATATGTACC ATATGTTATA GAGCCATCAT TAGGAGCTGA CAGGGTTGCA TTAGCATTCT TAGTTGAAGC TTATGATGAG GAAGAATTAG AAGGAGCTAA CGGAAAGGTA GATGTAAGAA CAGTTATGCA CTTACACCCA GCTTTAGCAC CATTTAAGGC TGCTATATTA CCACTTTCTA AGAAATTATC AGAAAAAGCT GATGAGGTAT ATGCAGAACT TAGCAAACAC TTCAATGTTG ATTATGATGA AACAGGAAGT ATCGGTAAGA GATATAGAAG ACAAGATGAA ATAGGAACTC CATTCTGTAT AACAGTTGAC TTCGATACTT TAGAAGATGG ATGTGTAACT GTAAGAGACA GAGATAACAT GGAACAACAA AGAGTTAAAA TAGAAGATGT AAGAGCTATA ATAGAAAAAA GCTTAGAATT CTAG
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Protein sequence | MAVEKTMDKI VALCKNRGFI FPGSEIYGGL ANSWDYGPLG VEFKNNVKRA WWKKFVQESK YNVGLDSAIL MNREVWVASG HVGGFSDPLM DCKECKARFR ADKLVEDHMT ANGAEVATAD GWSNEELMDY ITKNNIVCPK CGKLNYTDIR KFNLMFKTFQ GITEDSKNEV YLRPETAQGI FVNFKSVQRT TRKKVPFGIA QIGKSFRNEI TPGNFTFRTR EFEQMELEFF CKPGTDLEWF NFWKDSCWNF LLNLGMKEEN IRMRDHGEEE LSFYSNATSD IEYLFPFGWG ELWGIADRTD YDLNKHAEHS GQDMTYLDPT TNEKYVPYVI EPSLGADRVA LAFLVEAYDE EELEGANGKV DVRTVMHLHP ALAPFKAAIL PLSKKLSEKA DEVYAELSKH FNVDYDETGS IGKRYRRQDE IGTPFCITVD FDTLEDGCVT VRDRDNMEQQ RVKIEDVRAI IEKSLEF
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