Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2453 |
Symbol | |
ID | 4204359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 2668384 |
End bp | 2669265 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 642567001 |
Product | mccF-like protein |
Protein accession | YP_699715 |
Protein GI | 110801607 |
COG category | [V] Defense mechanisms |
COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGAAAT TTCAAAAATT AAAAATTGGT GATACTATAG GTATTGTTTC CCCTGCCAGT GGAGATAGTA CCGATGTAAT AAACTATAAT ATATCTTCAT TTAAAAATCT TGGCTTTAAA ATTAAAGAAG GAAAATATTT AAGAAAAAAA AATGATTATC TAGCTGCTTC TGACAAAGAA AGAGCTGAAG ATTTAATGGA GATGTTTAAG GATAAGGAAG TTAAAGCAAT AGTAGCTTAT AGAGGTGGGT ATGGATGTAT AAGAATGTTA CCCTATTTAG ATATAGGAGT AATTAAAAAA AACCCAAAAA TTTTATGTGG TTACAGTGAT TTAACAGTTC TCTTAAATTA CGCATCTCAA AAGACAGGCT TAATAACATT TCATGGACCT ATGATAAATT CTAAAATTAG TTCAGATGAA ATAACTAAAA ATAGCTTTCT ATCACTTCTT ACTGATGAGA GCAATTTAAT TAATATATCT ACAAAGGATT TTAAAGTTGA AAATAAAGAA CTATTTAGAG GGATTCTTTG TGGTGGAAAT CTAACTATGA TATGTAGCAC CTTAGGAACT CCTTATGAAA TAAATACTAG AAATAAAATT CTCATGATTG AAGATGTAAA TGAAGAGAAT TATGCTATAG ATAGATACTT AATGCAATTA AAACTTTCAG GTAAACTAGA TTCTTGTAGA GCTTTTTTAA TAGGTCATTT CACCCCATAT AATCCAAAAA CAATTAATAC TATACTTTCT ATACTATTGC CATATAAAAA ACCAATTATA TATAATATTC CTTTTGGTCA TGACTATCCT AATATAACCT TACCAATAGG ATCATCAATT CTTTTCGACC CAGCTAAAGA TAAATTAATA ATAAAATACT AA
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Protein sequence | MVKFQKLKIG DTIGIVSPAS GDSTDVINYN ISSFKNLGFK IKEGKYLRKK NDYLAASDKE RAEDLMEMFK DKEVKAIVAY RGGYGCIRML PYLDIGVIKK NPKILCGYSD LTVLLNYASQ KTGLITFHGP MINSKISSDE ITKNSFLSLL TDESNLINIS TKDFKVENKE LFRGILCGGN LTMICSTLGT PYEINTRNKI LMIEDVNEEN YAIDRYLMQL KLSGKLDSCR AFLIGHFTPY NPKTINTILS ILLPYKKPII YNIPFGHDYP NITLPIGSSI LFDPAKDKLI IKY
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