Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2393 |
Symbol | rpsC |
ID | 4205351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2613411 |
End bp | 2614079 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642566942 |
Product | 30S ribosomal protein S3 |
Protein accession | YP_699657 |
Protein GI | 110803016 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGACAAA AAGTACATCC TCACGGACTA AGAGTTGGTG TAATTAAAGA TTGGGATGCA AAATGGTATG CTGATAAGAA AAATTTTGCT GATAACTTAA TCGAAGACCA ACAAATAAGA AAATTCATAA AGAAAGAACT TTTCTCAGCT GGAATCGCTA AGATTGAAAT CGAAAGATCA GCTAAAAGAG TTAAGTTAAA CATACACACA GCTAAGCCAG GTGTAATCAT CGGAAAAGGT GGTTCAGGAA TCGAAAGATT AAAAGCTAGC TTAAAAAATA TAATAGCTGA GAAAAATGTT TTAATAAACA TTGTTGAGGT TAAGAACGCT GAAACTAACG CTCAATTAAT GGCTGAAAAC ATTGCTGCTC AATTAGAAAA GAGAATATCA TTCAGAAGAG CTATGAAGCA AACTATCCAA AGAGCAATGA AAGCTGGCAC ATTAGGTGTT AAAACTGCTT GTTCAGGAAG ATTAGGTGGA GCTGAAATAG CAAGAACTGA GCAATACAAT GAAGGAACAA TCCCACTACA AACAATAAGA GCTGACATCG ACTATGGATT TGCTGAAGCT GATACAACTT ACGGTAAAAT CGGTGTTAAA GTGTGGGTTT ACAATGGAGA AGTTCTTCCA ACTAAAAAAG TTGAAAAAAA GGAAGAAGCT AACGCATAA
|
Protein sequence | MGQKVHPHGL RVGVIKDWDA KWYADKKNFA DNLIEDQQIR KFIKKELFSA GIAKIEIERS AKRVKLNIHT AKPGVIIGKG GSGIERLKAS LKNIIAEKNV LINIVEVKNA ETNAQLMAEN IAAQLEKRIS FRRAMKQTIQ RAMKAGTLGV KTACSGRLGG AEIARTEQYN EGTIPLQTIR ADIDYGFAEA DTTYGKIGVK VWVYNGEVLP TKKVEKKEEA NA
|
| |