| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2383 |
|---|
| Symbol | rplR |
|---|
| ID | 4206115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 2609502 |
|---|
| End bp | 2609861 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 642566932 |
|---|
| Product | 50S ribosomal protein L18 |
|---|
| Protein accession | YP_699647 |
|---|
| Protein GI | 110803787 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0256] Ribosomal protein L18 |
|---|
| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAAA AGGCAGACAG AAAAGAAGCA AGAGAAAGAC GTCACCTAAG AGTTCGTAAG
AAGGTATTCG GAACTCCAGA AAGACCAAGA TTATCTGTAT ATAGAAGTGA AAAGAACATA
TATGCTCAAA TAATAGACGA CGTTAATGCT GTTACTTTAG TAGCTGCTTC AAGCTTAGAT
AAAGCTATCG AAGTTAAAGG AAGCAACAAA GAAGCTGCTA AATTAGTTGG AGAATTAGTT
GCTAAAAGAG CTATAGAAAA AGGAATAAAT GATGTAGTAT TCGACAGAGG TGGATACGTA
TATCACGGAA GAGTTGAGGC TTTAGCTAGC GGAGCAAGAG AAGCCGGATT AAAATTCTAA
|
|---|
| Protein sequence | MFKKADRKEA RERRHLRVRK KVFGTPERPR LSVYRSEKNI YAQIIDDVNA VTLVAASSLD
KAIEVKGSNK EAAKLVGELV AKRAIEKGIN DVVFDRGGYV YHGRVEALAS GAREAGLKF
|
|---|
| |