Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2356 |
Symbol | |
ID | 4205663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2587262 |
End bp | 2589493 |
Gene Length | 2232 bp |
Protein Length | 743 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642566906 |
Product | ribonucleotide-diphosphate reductase subunit alpha |
Protein accession | YP_699621 |
Protein GI | 110802610 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACTAT TAGAGAGATA TTGTGCATGG TCTATAGAAG AGCTGAATGA TGAAACAGGA TTATATACTG AAGAAAAGTT AATGGTTGCT TTAGATAATA TAGTTACGTC AAAAATGGAA GAAAAAGAGA TAATAAAATC TTTCATACAA GTTTCATTAG AGTTAACTTC TCAAGTAGAA CCAAGATGGC AGGAAATTGC GGCGAAGTTA TATGTTAAAA ATTTATATGA AGAAGTAAGA ACAAATAGAG GATTAGAAGA AGGAGCAAAT CCATATGATA ATTTTTATGG TTTTATAAAG GAACTTACTG ATAAAGGGTT ATACGGAAAA TATATTTTGG ATAATTACTC TAAGGAAGAT ATAGAAGAAT TAGAAAAAGA AATAAAAAGA GAGAGAGATT TTTTATTTAC ATACAGTGGA ATAAATTTAT TAGCAAAAAG ATACTTAGTT CAAGATTTTA ATAGATTACC ATTAGAACTT CCTCAACAAA TGTTTATGGG AATTGCTATG CACCTTGCTA TCCCTGAGAA GAAGGAAAAA AGACTTTATT GGGCAAAAAG ATTTTATGAT GTTTTAAGTT CAATAAAGGC TACAATGGCT ACTCCAACTA TGTCTAATGC TAGAAAGCCA TTCTACCAAT TAAGTTCATG TTTTATAGAT ACTGTAGATG ATAGTTTAGC CGGTATATAT AAATCATTAG ATAATTTCTC AAAGGTTTCT AAGTTTGGTG GCGGAATGGG AATTTATATG GGTAAGGTAA GAGCCTTAGG CTCAGCCATA AGAGGTTTTA AAGGTGCATC AGGTGGAATT ATACCTTGGA TAAAATTATT CAATGATACA GCCATAGCTG TTGACCAATT AGGAGTTAGA AACGGATCAG TTGCTATTTG GTTAGATGCA TGGCATAAAG ATTTACCAGA GTTTCTTCAA ATAAAAACAA ACAACGGAGA CGATAGAAAA AAAGCTCATG ATATATTCCC GGGACTTTGT TATCCAGATT TATTCTGGAA GTTAGCAGAA AATGATATAG ATGCTAACTG GTATATGATG TGTCCTCATG AAATAAAAAC TGTTAAAGGA TATTCTTTAG AAGATTTCTA TGGGGAAGAA TGGGAAAAGA AATATTATGA GTGTGTAGAA GATGATAGAA TAGAAAAGAG AGTTATGAGT GTTAAGGATA TTGTAAGACT TATAATAAAA AGTGCTGCAG AAACAGGAAC ACCATTTGCT TTCTATAGAG ATACAGTAAA TAAATTTAAT CCTAATAAAC ACAAAGGAAT GATATATTCA TCAAATCTTT GTACTGAAAT AATGCAAAAC ATGAGTGCTA TGGAGATAGA ACAAACAGAA ATTAAGGACG AAAATGGTGA TGTAGTAGTT ATTGAAAAAA CTAAGCCAGG AGACTTTGTT GTTTGTAATC TTTCTTCAGT GGTATTAGGA AATGTTGATG TTACATCAGA TGAAGAAGTG GAATACGTTG TTGAAACTCA AATAAGAGCA ATGGATAACG TAATAGATTT AAATTATTAT TCAGTTCCAT TTGCTGAAAT AACAAACAAG AAATATAGAG CTGTTGGATT AGGAACATCA GGATACCATC ATATGCTTGT AAATAATAAG ATTGTATGGG ACTCAGAGGA ACACTTGAAC TTTGTAGATA AAGTTTATGA GAGAATAAAC TTCTATGCTA TAAAAGCTAG TTTAAATATA GCAAAGGAAA AGGGAAGCTA TCCATTATTT GAAGGATCAG ATTGGAGCAA TGGTGATTAT TTTGAACTAA GAGAATATAA TTCACCACAG TGGAAAGAAT TAAAAGAAGA GATTGCTAAA TATGGTATGA GAAATGGATA CCTATTTGCA GTAGCTCCAA ATGGTTCAAC TGCCACTTTA GCTGGAACTT CAGAAGGGGT AGACCCTGTT ATGAATAGAT TCTGGTTAGA AGAGAAAAAA GGAAGCATAA CTCCAAAGGT AGCACCTGGA TTATGTCAAG AAAATTTTTG GTACTATGTT TCAGCTTACA ATGTAAATCA AGAATTTACA GTTAGAGCAA ACGGAGTAAG ACAAAGACAT ATAGACCAAG GACAATCATT TAACCTTTAT ATAACTACAG ATTATACTAT GAGACAAATA ATGAATCTTT ATATTTCAGC TTGTAAAAAT GGAGTTAAAA GCATTTATTA TGTAAGAAGC AAATCTCTAA GTGTTGACGG ATGTGAGAGC TGTTCAGCTT AG
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Protein sequence | MTLLERYCAW SIEELNDETG LYTEEKLMVA LDNIVTSKME EKEIIKSFIQ VSLELTSQVE PRWQEIAAKL YVKNLYEEVR TNRGLEEGAN PYDNFYGFIK ELTDKGLYGK YILDNYSKED IEELEKEIKR ERDFLFTYSG INLLAKRYLV QDFNRLPLEL PQQMFMGIAM HLAIPEKKEK RLYWAKRFYD VLSSIKATMA TPTMSNARKP FYQLSSCFID TVDDSLAGIY KSLDNFSKVS KFGGGMGIYM GKVRALGSAI RGFKGASGGI IPWIKLFNDT AIAVDQLGVR NGSVAIWLDA WHKDLPEFLQ IKTNNGDDRK KAHDIFPGLC YPDLFWKLAE NDIDANWYMM CPHEIKTVKG YSLEDFYGEE WEKKYYECVE DDRIEKRVMS VKDIVRLIIK SAAETGTPFA FYRDTVNKFN PNKHKGMIYS SNLCTEIMQN MSAMEIEQTE IKDENGDVVV IEKTKPGDFV VCNLSSVVLG NVDVTSDEEV EYVVETQIRA MDNVIDLNYY SVPFAEITNK KYRAVGLGTS GYHHMLVNNK IVWDSEEHLN FVDKVYERIN FYAIKASLNI AKEKGSYPLF EGSDWSNGDY FELREYNSPQ WKELKEEIAK YGMRNGYLFA VAPNGSTATL AGTSEGVDPV MNRFWLEEKK GSITPKVAPG LCQENFWYYV SAYNVNQEFT VRANGVRQRH IDQGQSFNLY ITTDYTMRQI MNLYISACKN GVKSIYYVRS KSLSVDGCES CSA
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