Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2341 |
Symbol | hydA |
ID | 4206336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2568433 |
End bp | 2570151 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642566891 |
Product | iron hydrogenase |
Protein accession | YP_699606 |
Protein GI | 110803368 |
COG category | [C] Energy production and conversion [R] General function prediction only |
COG ID | [COG1034] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
TIGRFAM ID | [TIGR02512] hydrogenases, Fe-only |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA TAATAATCAA TGATAAGACT ATCGAATTTG ATGGTGACAA GACGATACTT GACTTAGCAA GAGAGAATGG GTTTGACATT CCAGTGCTTT GTGAGTTAAA AAATTGCGGA AACAAAGGAC AATGTGGAGT TTGTCTTGTT GAGCAAGAAG GAAATGATAG ACTATTAAGA TCTTGTGCAA TAAAAGCTAA AGATGGAATG GTTATTAAAA CTGATAGTGA AAAAGTACTA GAAGCTAGAA AAGAAAGAGT TGCAGAACTT TTAGATGAGC ATGAGTTCAA ATGTGGACCA TGTAAAAGAA GAGAGAATTG TGAATTCTTA AAACTTGTAA TTAAAACAAA GGCAAGAGCT CACAAACCAT TTGTAGTTGC AGATAAATCA GAATATGTAG ATGACAGAAG TAAATCAATA GTTTTAGATA GAAGTAAATG TGTTAAATGT GGTAGATGTG TTGCTGCATG TAGAACAAGA ACTGCTACTA ACTCAATAAA ATTCCACAGA ATTGATGGAG TAAGATTAGT AGGACCAGAG GAATTAAAAT GTTTCGACGA TACAAATTGT TTATTATGTG GACAATGTGT AGCTGCTTGT CCAGTTGATG CATTATCAGA AAAATCACAT ATTGAAAGAG TTCAAGATGC ATTAAATGAT CCAGAAAAGC ATGTAATAGT TGCTATAGCA CCAGCTGTAA GAACATCAAT GGGTGAATTA TTCAAAATGG GTTACGGCCA AGATGTTACT GGAAAATTAT ATACTGCTTT AAGAAAACTA GGTTTTGATA AAGTATTTGA TATAAACTTC GGTGCTGATA TGACAATAAT GGAAGAAGCT ACTGAGCTTA TAGAAAGAAT AAAAAATAAT GGGCCTTTCC CAATGTTAAC TTCATGTTGC CCATCATGGG TTAGAGAAGT TGAAAACTAC TTCCCAGAAT TAGTAGAAAA TCTTTCAACA GCTAAGTCAC CACAACAAAT ATTTGGTTCA GCATCAAAAA CTTATTATCC TCAAGTTGCT GATATAGATC CTAAAAAAGT ATTTACAGTA ACTGTAATGC CTTGTACTTC TAAAAAATTC GAAGCTGATA GACCTGAAAT GGAAAACGAA GGAATAAGAA ATATAGATGC AGTTATAACA ACTAGAGAGT TAGCTAGAAT GATAAAGGCT GCTAAAATAG ATTTTGCTAA ATTAGAAGAC AGTGAAGTAG ATCCAGCTAT GGGTGAGTAT ACTGGAGCAG GTGTTATATT TGGAGCTACT GGTGGAGTTA TGGAAGCTGC TTTAAGAACA GCTAAAGATT TCATGGAAAA TGATAACTTA GACAATGTAG ATTATGAAGC TGTTAGAGGA TTAGCTGGAA TAAAAGAAGC TGAAGTAGAA ATAGCAGGAA ATGAATATAA ATTAGCTGTT GTAAATGGAG CTGCTAATGT ATTTGAATTA GTTAAGTCTG GTAAAATAAA TGATTACCAC TTCATCGAAG TAATGGCATG TCCAGGTGGA TGTGTTAACG GTGGGGGACA ACCACATATC TCAGCTGAAG ATAGTGATAA AATTGATATT AGAGAAGTAA GAGCTTCTGT TCTTTACAAT CAAGATAAGA ATTTAGAGAA GAGAAAATCA CATCAAAACT CAGCTTTATT AAAAATGTAT GAAAACTACA TGGGTAAACC AGGTCATGGA AGAGCTCATG AGTTATTACA CATGAAATAT AAAAAATAA
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Protein sequence | MNKIIINDKT IEFDGDKTIL DLARENGFDI PVLCELKNCG NKGQCGVCLV EQEGNDRLLR SCAIKAKDGM VIKTDSEKVL EARKERVAEL LDEHEFKCGP CKRRENCEFL KLVIKTKARA HKPFVVADKS EYVDDRSKSI VLDRSKCVKC GRCVAACRTR TATNSIKFHR IDGVRLVGPE ELKCFDDTNC LLCGQCVAAC PVDALSEKSH IERVQDALND PEKHVIVAIA PAVRTSMGEL FKMGYGQDVT GKLYTALRKL GFDKVFDINF GADMTIMEEA TELIERIKNN GPFPMLTSCC PSWVREVENY FPELVENLST AKSPQQIFGS ASKTYYPQVA DIDPKKVFTV TVMPCTSKKF EADRPEMENE GIRNIDAVIT TRELARMIKA AKIDFAKLED SEVDPAMGEY TGAGVIFGAT GGVMEAALRT AKDFMENDNL DNVDYEAVRG LAGIKEAEVE IAGNEYKLAV VNGAANVFEL VKSGKINDYH FIEVMACPGG CVNGGGQPHI SAEDSDKIDI REVRASVLYN QDKNLEKRKS HQNSALLKMY ENYMGKPGHG RAHELLHMKY KK
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