Gene CPR_2172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_2172 
Symbolupp 
ID4204283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand- 
Start bp2398522 
End bp2399151 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content33% 
IMG OID642566722 
Producturacil phosphoribosyltransferase 
Protein accessionYP_699472 
Protein GI110803488 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0035] Uracil phosphoribosyltransferase 
TIGRFAM ID[TIGR01091] uracil phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0574841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAG TAACAGAAAT AACACATCCA CTTATATTAC ATAAGTTAGC ATTTATAAGA 
GATAAAAATA CAGGATCTAA GGATTTTAGA GAACTAGTAA GTGAAGTTTC TATGCTTATG 
GCTTATGAGG TAACAAGAAA TCTTCCTATG GAAGAAATAG AAATAGAAAC TCCAGTTTGC 
AAAACTAAAT GTAAAGTTTT AGCTGGTAAA AAAGTTGCTA TAGTTCCAAT ATTAAGAGCC 
GGATTAGGTA TGGTAGATGG TATGCTACAA CTTATCCCAG CAGCAAAAGT AGGGCATATA 
GGACTATACA GAGATGAAGA AACTCTTCAA CCTGTAGAAT ATTTCTGTAA GTTACCACAA 
GATATAGCTG AAAGAGATAT AATAGTTGTT GATCCAATGT TAGCTACAGG TGGCTCTGCT 
ACAGATGCTA TAACTCTTTT AAAGAAAAGA GGAGCTAAGC AAATAAGACT TATGTGTTTA 
ATTTCTTCAC CAGAAGGAAT AGAGTTTGTA CAAAAAGCTC ATCCAGATGT TGATATATAT 
GTTGCATGTA TTGATGAAAA ATTAAACGAT CATGGATATA TCGTTCCAGG ATTAGGTGAT 
GCAGGAGATA GACTATTTGG AACAAAATAG
 
Protein sequence
MSKVTEITHP LILHKLAFIR DKNTGSKDFR ELVSEVSMLM AYEVTRNLPM EEIEIETPVC 
KTKCKVLAGK KVAIVPILRA GLGMVDGMLQ LIPAAKVGHI GLYRDEETLQ PVEYFCKLPQ 
DIAERDIIVV DPMLATGGSA TDAITLLKKR GAKQIRLMCL ISSPEGIEFV QKAHPDVDIY 
VACIDEKLND HGYIVPGLGD AGDRLFGTK