Gene CPR_2144 details

Gene Information

• Locus tag: CPR_2144
• Symbol: nagA
• ID: 4204116
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 2377874
• End bp: 2379007
• Gene Length: 1134 bp
• Protein Length: 377 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 642566694
• Product: N-acetylglucosamine-6-phosphate deacetylase
• Protein accession: YP_699451
• Protein GI: 110801541
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1820] N-acetylglucosamine-6-phosphate deacetylase
• TIGRFAM ID: [TIGR00221] N-acetylglucosamine-6-phosphate deacetylase

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAATAA AAGACTGTAA TGTAGTATAT TTAGATAAGA TTGAAAAAGG AAATATACTT 
ATAGAAAACG GAAAGATAAA GGCTATAAAT CCTAAAGAAT GTAATTGTGA AATAATTGAT 
GGAGAGGGCT TATTCCTATC TCCAGGATTT ATAGATGTTC ATATACACGG TGCTGGTGGT 
CACGATACTA TGGATGGTAC TTATGAAGCT ATAAATGAAA TATCAAAAGT TATAGTTAAA 
CATGGTACTA CTTCATTTTT ACCAACAACA ATGACTGTAG CTGCTGAAGA CGTATGCAAA 
TCAATGGAAG CTATTCATAA AGCAAAAACT AAAGGAACAG ATGGAGCTAA TGTTTTAGGT 
GCTCACTTAG AAGGACCATT TATAAGCCCA AGTGCAATAG GTGCTCAAAA TCCTGATTTC 
TTAATCCCTC CAACAAAAGA AAACTTCTAT AAATTAGTTG GAGAACATGA AGATGATGTT 
GTTTCAATAA CTCTTGCTCC TGAAGTAGAA GGCGCTAAAG AACTTACTAA ATTCTTAAGT 
GAAAAAGGTA TAGTTGTTTC AATGGGACAT ACTAAAGCTA CTTATGAAGA AGCTATGGAA 
GGAATAAAAT GTGGATGCTC TCATGCCACT CATTTATTCA ATGCAATGAC TCCATTTACT 
CATAGAGAAC CTGGAGTTGT AGGTGCTGTT TTTGATAGTG AAATAACTAC TGAAACAATC 
TCAGATGGTA TTCACATAGC ATATCCAAGT TTAAGAGTTG CCTATAAACA AAAAGGAACA 
GATAAGGTTT TATTAATAAC TGATGCTATG ATGGCTTGCT GTATGCCTGA TGGAATGTAT 
TCATTAGGAG GACAAGATGT TGAAGTTAAA AATGGAGCTG CAAGATTATT GAGTGGTTCT 
TTAGCAGGAT CAATTTTAAC TTTAGATGTG GCAGTTAAAA ATATATTTAA AAACACTAAT 
TATTCACTTA ATGAAGTTAT AAAAATGGCT ACTTATAACG GAGCTAAACA CTGCAAAGTT 
GATGACAAAA AAGGATTAAT TAAAGAAGAC TATGATGCTG ACTTAATTCT TTTTGATGAT 
AATATAGATA TAAAATATGT AATAGTTAAT GGAAAATTAG TTCATAAAGC TTAA 

 

Protein sequence

MLIKDCNVVY LDKIEKGNIL IENGKIKAIN PKECNCEIID GEGLFLSPGF IDVHIHGAGG 
HDTMDGTYEA INEISKVIVK HGTTSFLPTT MTVAAEDVCK SMEAIHKAKT KGTDGANVLG 
AHLEGPFISP SAIGAQNPDF LIPPTKENFY KLVGEHEDDV VSITLAPEVE GAKELTKFLS 
EKGIVVSMGH TKATYEEAME GIKCGCSHAT HLFNAMTPFT HREPGVVGAV FDSEITTETI 
SDGIHIAYPS LRVAYKQKGT DKVLLITDAM MACCMPDGMY SLGGQDVEVK NGAARLLSGS 
LAGSILTLDV AVKNIFKNTN YSLNEVIKMA TYNGAKHCKV DDKKGLIKED YDADLILFDD 
NIDIKYVIVN GKLVHKA