| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2143 |
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| Symbol | |
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| ID | 4206381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2375503 |
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| End bp | 2377737 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642566693 |
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| Product | RecD/TraA family helicase |
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| Protein accession | YP_699450 |
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| Protein GI | 110803510 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGTAT TAAATGGAAT AGTTGAGAGT ATAGTATTTA AAAGTTCGGA TACAGGGTAT
ACAGTTATAA AATTTAGAGA AAATAATATT ATTCATACAG CAGTGGGAGT TTTACCACAT
GTAAAAGAAG GTCAAAATTT AAAAATTACC GGAAGTTGGG TTAACCATTC ACAGTTTGGA
AAACAATTTA AAGTAGAAGA ATGTGAAGAG ATATTACCTA CTTCAAAGGA TGGAATAGAA
AAATATTTAT CTTCTGGGAT AATACAGGGG ATAGGACCTG TTACGGCAAA AAAAATTGTA
AATAAATTTG GAGAAGATAC TCTTAATATT TTAGATAATA ATATTGAGAG ATTAAAAGAA
ATAGAAGGAA TAGGTAAAAA GAAGTTAGAG ACCATAATTG AGTCTTATAG AGAACAAAGA
GAATTAAAAA ATATAACTAT ATTTTTACAA ACCCATGGAT TAAGTGTAAA TCAGTGCTTG
AAGATTTATA AAAAATATGG AGCTAGTTCA GTTGATACAG TTAAAAATAA TCCATATATA
CTTTGTGATG AAATTTCAGG AATAGGATTT AAGACATCTG ACAAAATTGC TAGGAGTTTA
GGGATAGAAA TTGATTCACC TTTTAGAATT CAAAGTGGTA TAAGATATGT AATAAATGAA
TTTTGTACTA ATGGGCACAC ATTTATGCCA AAGGATGAAC TTATAAAGGA AGCAAGTAAT
GTATTAACTG TAAGTGAAGA TATAATAGAA GAAAATATTA AAAATGCAGC TTTAGATAGA
AAAATAAAGT TAGAGAAAGT TAATGATAAA GAAGGTGTTT TCACAATACC TAATTATTAT
TGTGAGCTTG GAATAACTAA TAGGATTTTA ACTTTAGCTA TAAGCAATTT CCAAGATATA
AGTGTAGATG TAGATCACCT AATACTTCAA TTTGAAAAGA AAAATAATAT AACTTTTGCA
GAATCCCAGA AAGATGCTAT AATAAGTGCT TTTCAAAATG GAATAGAGAT AATAACTGGG
GGACCAGGAA CAGGAAAGAC CACTATAATA AAGTGTATAA TTGAAATTTT TGAAACCTGT
GGTTTGAAGG TTCTTTTGGG AGCACCTACT GGAAGAGCGG CTAAAAGAAT GAGTGAGTCT
ACAGGAAAAG AAGCTACCAC AATACATAGA ATGCTTGACA TGGGAGTCTT TGAAAAAGAA
GAAAGTGTTT TTGTAACCAA TGCAGAGGAA CATTCCTTAG AGGCTGATGT GGTTATAATA
GATGAGGCAT CAATGATTGA TATAACTTTA ATGAATGCTT TACTTAAATC TATTAAGGTA
GGTACTAGGC TTATAATAGT AGGAGATGTT GATCAGCTTC CATCAGTAGG AGCTGGAAAT
GTATTAAATG ATTTTATAGA GAGTGGATTT ACAAAGGTTG TACGTCTAAA GGAAATATTT
AGACAAGGAA AAGAGAGTAT GATTGTAGTA AATGCACATA AAATAAATAA AGGTGAGATG
CCTAAGTTAA ATGAAAAAGG TACTGATTTC TTCTTCATAA GAAATGATAT TCAAGAAGGA
ATATTAAATA CTATTATAGA TTTAATAAAT ACTAGGTTGC CTAGGTTTAA TTCAAATTGG
GATAAGTTAA AAAGTATACA GGTTTTAGTT CCTATGAAAA AGGGTGTATT AGGAGTTACA
AATTTAAATG AAAGAATTCA AAATGTCTTA AACCCAAAGG CTCCGTATAA AAAAGAAAAA
GAATTTAGAA GTATGGTATT TAGAGAGGGA GATAAGGTTA TGCAGATAAA GAATAACTAC
TCTCTAAAAT GGACCAGAAT AGCTGGAAAG GGTGACCATG AAGGTTTGGG TGTATTTAAT
GGAGATATGG GATTTATAGA AAGTATAGAT TTAGAAGGGA AAAAACTATC TATAATCTTT
GATGATGAAA GAAGAGTTAT TTATGATTTT ATTTATTTAG ATGAGTTAGA TTTGGCTTAT
GCAATCACAA TACATAAAAG TCAAGGAAGT GAATTCCCTG TAGTAATAAT ACCTGCATAT
ATGGGAGCAC CATTACTTAT GAATAGAAAT TTATTATATA CAGGAATAAC TAGGGCAAAA
GAAATGGTTG TAGTAGTTGG AATACCTAAA GCATTAAAAT ACATGGTTGA TAATACAAGG
AGTATGGAAC GCTATTCCTC TTTAAATTGG AGAATAAAAG AAGTAATATC TAATGAGGTT
TTTGAACAAG ATTAA
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| Protein sequence | MEVLNGIVES IVFKSSDTGY TVIKFRENNI IHTAVGVLPH VKEGQNLKIT GSWVNHSQFG
KQFKVEECEE ILPTSKDGIE KYLSSGIIQG IGPVTAKKIV NKFGEDTLNI LDNNIERLKE
IEGIGKKKLE TIIESYREQR ELKNITIFLQ THGLSVNQCL KIYKKYGASS VDTVKNNPYI
LCDEISGIGF KTSDKIARSL GIEIDSPFRI QSGIRYVINE FCTNGHTFMP KDELIKEASN
VLTVSEDIIE ENIKNAALDR KIKLEKVNDK EGVFTIPNYY CELGITNRIL TLAISNFQDI
SVDVDHLILQ FEKKNNITFA ESQKDAIISA FQNGIEIITG GPGTGKTTII KCIIEIFETC
GLKVLLGAPT GRAAKRMSES TGKEATTIHR MLDMGVFEKE ESVFVTNAEE HSLEADVVII
DEASMIDITL MNALLKSIKV GTRLIIVGDV DQLPSVGAGN VLNDFIESGF TKVVRLKEIF
RQGKESMIVV NAHKINKGEM PKLNEKGTDF FFIRNDIQEG ILNTIIDLIN TRLPRFNSNW
DKLKSIQVLV PMKKGVLGVT NLNERIQNVL NPKAPYKKEK EFRSMVFREG DKVMQIKNNY
SLKWTRIAGK GDHEGLGVFN GDMGFIESID LEGKKLSIIF DDERRVIYDF IYLDELDLAY
AITIHKSQGS EFPVVIIPAY MGAPLLMNRN LLYTGITRAK EMVVVVGIPK ALKYMVDNTR
SMERYSSLNW RIKEVISNEV FEQD
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