| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2075 |
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| Symbol | |
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| ID | 4205706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 2300574 |
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| End bp | 2301941 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 642566625 |
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| Product | sigma-54 dependent transcriptional regulator |
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| Protein accession | YP_699384 |
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| Protein GI | 110802961 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.850958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATATAA ATTTTGAAAA ATTATTTTTA TTAGAAAATT TGACAAATCA CATTCCACTT
GGATTAATTT TTATATCACC AGAAAATAAA ATAGATTTCA TTAACAAAAA AGCTGAATCT
TTTTTAAATA GTAAATCTAA ATCAGTTGAA AATATAGATA TATTTTCATT TTTTCCTCAA
TTAAATGAGC TTATTAATAA TTCCTCTTCA AAAAAGAACA ATCAAAAAGA TGCACTTGTA
ACTTCTTTAG ATGGTAACAA ATATAATCTT GATATTTGCC CTATAAATGA TGGAGATATA
TTTGTAGGTT GGCTTTTAAT ACTAAAAGAC TTAAAAGAAA TAATAAGTAC TGTAAATAAA
TATTCTAACC AAGAGGCTGC TTATACATTT GATGATATAA TAGGTGAAAG TCCACAGTTA
AAAAAAGTAT TAAGAGATGC TGAGCTTATT TCAAAAAGTC CATCAACTGT TCTTATTACT
GGTGAAAGTG GTTGTGGAAA AGAATTACTT GCTCAATCAA TACATAACGC TAGCAATGTG
TCAAATGGTC CTTTTATTGC ATTGAATTGT GGTGCCATAC CTAAAACTTT AATAGAAAGT
GAACTTTTTG GTTATGAAGA AGCCTCATTT ACAGGTTCTA GAAAAGGTGG AAAACCAGGT
AAATTTGAAT TAGCAGATGG TGGAACTATA TTTTTAGATG AAATATGCGA AATGCCAATA
GAAATGCAAG TAACACTTCT TAGAGTTATT CAAGAAGGAG TAGTAACAAG AATAGGTGGA
AAAACTCAAA TACCTATAAA CGTAAGAATT ATAGCTGCTA CAAATAAAAA TTTAAAAGAA
GAAATAAAAA AAGGAACTTT CAGAGAAGAT TTATACTATA GATTAAACGT AATGCCACTT
CATCTTCCTC CTTTAAAGGA TAGATTAGGA GATGTTCCTA TTTTAATAAA CTATTTTTTA
AATATAAAAA GCCAAAAATT GCACAAAGGT ATTCCTAATA TAAATCAAAA ACTCTATAAA
AAGATGATTT CTTATTGTTG GCCTGGTAAT ATAAGAGAAC TTGAAAATTG TGTTGAAAAT
ATAGTTAATC TAAATGGTTC TACTTCTTAT GAAATTAATT TTGATGAATG TCATTGTCTT
AAAACAGATA ACTTAGGTAA TCCTATTAAC CCGAATTCAT TAGATTTACC TGAAAGTTAT
AATGAAAATT CAATTAAACC TCTAATAATT TTAGAAAAAG AAGCTATAGA AAAAGCTTTA
TGTACATTTG ATGGAAACAT AACTAAAGCT TCTAATGCTC TTGGTATTAG TAGAAATGCT
CTATATAATA AAATAAAGAG ATATGGAATA AACAAATATA ATTATTAA
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| Protein sequence | MDINFEKLFL LENLTNHIPL GLIFISPENK IDFINKKAES FLNSKSKSVE NIDIFSFFPQ
LNELINNSSS KKNNQKDALV TSLDGNKYNL DICPINDGDI FVGWLLILKD LKEIISTVNK
YSNQEAAYTF DDIIGESPQL KKVLRDAELI SKSPSTVLIT GESGCGKELL AQSIHNASNV
SNGPFIALNC GAIPKTLIES ELFGYEEASF TGSRKGGKPG KFELADGGTI FLDEICEMPI
EMQVTLLRVI QEGVVTRIGG KTQIPINVRI IAATNKNLKE EIKKGTFRED LYYRLNVMPL
HLPPLKDRLG DVPILINYFL NIKSQKLHKG IPNINQKLYK KMISYCWPGN IRELENCVEN
IVNLNGSTSY EINFDECHCL KTDNLGNPIN PNSLDLPESY NENSIKPLII LEKEAIEKAL
CTFDGNITKA SNALGISRNA LYNKIKRYGI NKYNY
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