| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2046 |
|---|
| Symbol | |
|---|
| ID | 4206454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 2264082 |
|---|
| End bp | 2265572 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642566596 |
|---|
| Product | amino acid permease family protein |
|---|
| Protein accession | YP_699355 |
|---|
| Protein GI | 110801782 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAATA GTAATGATGG AAAAAAACTT ATGTGGTATA ACCTTGGTTT AATGGCCTTT
GTATCAGTTT GGGGCTTTGG TAACGTAGTA AATAACTTCG CAACTCAAGG TTTAACCGTA
ATAACTTCAT GGATATTAAT AATAGCTTTA TACTTCGTAC CATATGCGCT TATGGTTGGA
GAATTAGGCT CAACTTTTAG AGATAGTAAA GGTGGCGTAA GTTCGTGGAT AAGTAAAACA
ATGGGGCCTA CATTAGCTTA CTTAGCAGGT TGGACTTATT GGGTGGTACA TGTGCCTTAT
TTAGCGCAAA AACCACAAGC AGTACTTGTT TCATTAGGAT GGGCAGTATT CCAAGATGGA
AGCACTATAA AAGGTATAGA TTCTAAAATT ATTCAATTAG TATGTTTAGT AGTATTCTTA
TTCTTTGTAT GGATTGCCTC AAGAGGAGTA AATTCATTAG GGAAAATAGG TACAATAGCA
GGAACAGCAA TGTTTGTTAT GTCTATTCTT TATATAGTAC TTATGTTAAC AGCACCTGCT
ATTACAGGAA CTTCTATAGC AAGTCCAAAT ATGACTTCTA TAAAAACCTA TATACCAAAA
TTTGATTTTG CCTATTTTAC CACTATAGCT ATGTTAGTAT TCTCAGTTGG AGGAGCTGAA
AAGATATCTC CATATGTTAA CAACATGAAA GATTCTAAAA AAGGTTTCTC AAAAGGTATG
ATAGCTTTAG CTATAATGGT TGCAGTTACA GCACTTCTTG GATCAGTAGC AATGGGAATG
ATGTTTGATG CAAATAATGT TCCTGATGAC TTAATGTTAA ATGGTGCTTA CTATGCATTC
CAAAAGTTAG GTAATTATTA TGGAATAGGA AATTCTTTAT TAATATTATA TGCATTAGCA
AACTTTGCAG CTCAAGTTTC AGCATTAGTA TTCTCAATAG ATGCTCCATT AAAAGTTTTA
TTATCAGATA CTGATGCAAG ATATGTTCCA ATAGCATTAA CTAAGACTAA TAAGAATGGG
GCTCCAATAA ATGGATATAT AATGACTTCT ATTTTAGTTG GAATATTAAT AATAGTTCCA
GCTTTAGGAA TTGGAAACTT TAATGCTTTA TTTACTTGGT TATTAAAATT AAATGCTGTT
GTTATGCCAA TGAGATATTT ATGGGTATTC TTAGCTTACA TAATGTTAAG AAAAGCTATA
AAAGGAAAGT TCAAATCAGA GTACAAATTT GTTAAAAATG ATAAATTCGC AATGTTAATA
GGTACTTGGT GTTTTGTATT TACAGCATTT GCTTGTATAT TAGGTATGTT CCCAACAGAT
GTTAAAGCAT TCTCAGGAGA ATGGATTTTC AGAGTAGGAA TGAATATTGG TACACCTTTA
GTATTAATAG GATTAGGTTT AATATTACCT AAAATAGCTA AGAGAACTAA CGGACAAGCA
TACAAGGATG CAGTAAGAGA AGCTACAGCA ACAAAGTTAG AACTTAATTA G
|
|---|
| Protein sequence | MGNSNDGKKL MWYNLGLMAF VSVWGFGNVV NNFATQGLTV ITSWILIIAL YFVPYALMVG
ELGSTFRDSK GGVSSWISKT MGPTLAYLAG WTYWVVHVPY LAQKPQAVLV SLGWAVFQDG
STIKGIDSKI IQLVCLVVFL FFVWIASRGV NSLGKIGTIA GTAMFVMSIL YIVLMLTAPA
ITGTSIASPN MTSIKTYIPK FDFAYFTTIA MLVFSVGGAE KISPYVNNMK DSKKGFSKGM
IALAIMVAVT ALLGSVAMGM MFDANNVPDD LMLNGAYYAF QKLGNYYGIG NSLLILYALA
NFAAQVSALV FSIDAPLKVL LSDTDARYVP IALTKTNKNG APINGYIMTS ILVGILIIVP
ALGIGNFNAL FTWLLKLNAV VMPMRYLWVF LAYIMLRKAI KGKFKSEYKF VKNDKFAMLI
GTWCFVFTAF ACILGMFPTD VKAFSGEWIF RVGMNIGTPL VLIGLGLILP KIAKRTNGQA
YKDAVREATA TKLELN
|
|---|
| |