| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2015 |
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| Symbol | holA |
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| ID | 4205176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2221533 |
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| End bp | 2222579 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 642566565 |
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| Product | DNA polymerase III subunit delta |
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| Protein accession | YP_699324 |
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| Protein GI | 110802048 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAGATT TAGACGGTTT ATATGAAAAT TTGAAAAAAG GAAAGATAGA AAAAAGTTAT
ATATTAGTTG GATTAGATGA GCTTTTAATT AAAGAAGGTA TAGAAAATAT AATTGATAAT
GTATTAGATG AAGGATTTAA GGATTTAAAC CTAATTAGAT TAGATGGGAA TAACCTTAAT
TTTGATGATT TCATGAATGC TTGTGAAACA TTGCCTTTTA TGAGTGATAA AAAAGTAGTA
GTTTTAAATA GAACTAATAT ATTTAGGGAT AAACAAGATA AAGAAACTGA AAAATTATAT
AAGCAATGTG TAGAATATTT TCAAAATACA CCAGAACATT GTGTTTTAAT AGCATATACA
ACTTTAAAGG ATAAAAGGGA TAGAGTTAAT AGATTAAGCA AACTAAAAAA GCTTGAGAAG
AGCAGTTGTA TAGTTTCTGT TGAAAAGTTA AAAGGGGCAA AACTGCAACA AAAGGTAGGA
AGAATCTTTC AAAGATATAA TAAAAACATA GGAAAAATAG AATTAAAGTA CTTTTGTGAC
TCAGTAGAAA ATAACTTTGA TGTTATAGAA AGAGAAATTG ATAAAATAGT AAACTATGTA
GGGGAGAGAG AAATAACTAG AAAAGACATA GATTTACTAC TTCCTCCTAG GTATGAGGAC
GACATATTTG ATTTAGTTGA GCTTATTTCA ATTAAAAGAG CAAAGCAAGC CATAGACTTA
ATGGATGAAT TAATAGGCAG AGGACAAGAT CCTATATTTA TACTAAGTCA AATCAGAGAG
CAATTTCAAA AGTTACACAG GGTTAAAATA AGACTTTCTG AAAAGTATAG AATTGATGAA
ATAAAGAAAG ATTTTTTAGA AGCTAGCAGG GTAAATTTAC CTGACTTTGT AATAGAAAAA
TTTATTAATC AGAGTAAGAA GTTTTCTAAT AAACAGCTTA ATAAATGTAT TAATCTATGT
CTATATACAG AAAAGAAACT TAAGAGTAAT TCAAACTTAA ATAAAAAAAC AGAGTTAGAA
CTTATGATTG TAAGTACTGT AATATAA
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| Protein sequence | MIDLDGLYEN LKKGKIEKSY ILVGLDELLI KEGIENIIDN VLDEGFKDLN LIRLDGNNLN
FDDFMNACET LPFMSDKKVV VLNRTNIFRD KQDKETEKLY KQCVEYFQNT PEHCVLIAYT
TLKDKRDRVN RLSKLKKLEK SSCIVSVEKL KGAKLQQKVG RIFQRYNKNI GKIELKYFCD
SVENNFDVIE REIDKIVNYV GEREITRKDI DLLLPPRYED DIFDLVELIS IKRAKQAIDL
MDELIGRGQD PIFILSQIRE QFQKLHRVKI RLSEKYRIDE IKKDFLEASR VNLPDFVIEK
FINQSKKFSN KQLNKCINLC LYTEKKLKSN SNLNKKTELE LMIVSTVI
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