| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1959 |
|---|
| Symbol | |
|---|
| ID | 4204388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 2163904 |
|---|
| End bp | 2165019 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 642566509 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_699268 |
|---|
| Protein GI | 110801772 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3405] Endoglucanase Y |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.987661 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAAAT GGCTAATAGC TATAGGTGGT ATTTTAATAA TTGCTATTTT TATATTATTT
TTTAATAGAG AGTATTTAAA ACCAGTACAT ATGGATGTTA ATTGGAATGA TAATTTCAAT
CCACCAGAAG AAAAAATGCT TTTTGATTTT ATAGAGAAGG ATTTAAGTAA AAGTGGATAT
GGAATATATA CAAATTATAT AGATAAAAGT TCAGAAGGAG ATATAACTAA GGGGTACTCA
GTATTATCTG AGTCAGAAGG GCTTATGATG TTATATTCGG TAAATTCTAA TAATAAAGAA
TTATTTGATG AGCATTTTGA CATAGTAAAA GAAATGAGAT TAAAAAATGG ACTTATTAGT
TGGAGGAAAG AAGGAGATAA AAATTCACCG TCCTCTGCAA CTATAGATGA ACTTAGAATA
ATAAAAGCTC TTCTTTTAGC CAGCAACAGA TGGAATAGTT TTTATTATAA ATTTTATGCT
ATAAATATTG CTAACTCTTT ACTTAAACAT GCAGAAGAAA ATAAAACTTT AGTAGATTAT
ATAGATGACT ATGGAAAAGG GAATACAACT ACTTTATGTT ATTTAGACTT GCCTACTATG
AAATTATTGA GTCAAGTAGA TAAGAAGTGG GAAGGAATTT ATGAAAAATC TAACGGTATA
ATAGAAAATG GAAGAATATC TGAAGAGGTT CCTTTATATA GAAAAGTATT TTATGAAGAA
ACTCAAAAAT ATGATGAAGA AGAAAATGTT GATTTCTTAT TATCTACAAT AGTAATTTTA
AATAGAATTG AAGCTGGAGA AAATGAGGAG TCATCTATTA AATGGATAAA AGAAAAGTTT
AAGAAAGACG GATTCTTAGT AGCTACATAC AATGGTAAAA ATGGAGATGC TACCTCACAG
ATTGAATCTC CATCAATATA CTCTAATGTA GCTTTAATAG CAAATTACAT TGGAGATAAG
GAATTATTTA ACAAGGCTAT AGATAAATTA AAATATTATC AAATAAAAAA TAAAGATAGT
GTGCTTTATG GTGGATTTGG AGATGAAAAA ACAAATAGCG TATATTCTTT TGATAATTTA
AATGCACTAC TAGCTTTTCA AAAATATAAG GATTAA
|
|---|
| Protein sequence | MKKWLIAIGG ILIIAIFILF FNREYLKPVH MDVNWNDNFN PPEEKMLFDF IEKDLSKSGY
GIYTNYIDKS SEGDITKGYS VLSESEGLMM LYSVNSNNKE LFDEHFDIVK EMRLKNGLIS
WRKEGDKNSP SSATIDELRI IKALLLASNR WNSFYYKFYA INIANSLLKH AEENKTLVDY
IDDYGKGNTT TLCYLDLPTM KLLSQVDKKW EGIYEKSNGI IENGRISEEV PLYRKVFYEE
TQKYDEEENV DFLLSTIVIL NRIEAGENEE SSIKWIKEKF KKDGFLVATY NGKNGDATSQ
IESPSIYSNV ALIANYIGDK ELFNKAIDKL KYYQIKNKDS VLYGGFGDEK TNSVYSFDNL
NALLAFQKYK D
|
|---|
| |