Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1914 |
Symbol | ruvB |
ID | 4205513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2112595 |
End bp | 2113635 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642566464 |
Product | Holliday junction DNA helicase RuvB |
Protein accession | YP_699224 |
Protein GI | 110802636 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.881397 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAA GATTAGTTAC CTCTAATGAG ATTGGAATAG ATTCAACTAA TGAATACAGT TTGAGACCAG AGAAAATAAA TGAATATATA GGTCAAGACA AAGTTAAAGA AAGATTAAAC ATATTCATAA AAGCTGCTCA AAGAAGAGGG GAAGCCTTAG ACCATGTAAT TTTATATGGA CCACCAGGTC TTGGAAAGAC AACATTAGCT AATATAATAG CAAATGAAAT GGGTGGAAAT CTTAAAATAA CATCAGGGCC TGCTATTGAA AGAGCAGGAG ACTTAGCGGC GATATTAACA ACCTTAAACA CTAATGATGT TTTATTTATT GATGAGATAC ATAGATTAAA TAGAAGTGTA GAGGAAATAC TATATCCTGC CATGGAGGAT TATGTTTTAG ATATAATTAT TGGTAAGGGG GCTGCTAGTA AATCCATAAG ACTCGATTTA CCTAAATTTA CTCTAATAGG TGCCACAACT AGAATTGGTA TGCTTAGTTC ACCTTTAAGA GATAGATTTG GGGTTTTATG TTCTATGGAA TATTATACTG ATGAGCAATT AAAGGAAATA ATAATTAGAA GTGCTGAAAT TTTAGGATGC CATATAACTG AAGAAGGGGC CTTTGAAATT GCTAAAAGGT CAAGGGGTAC TCCTAGAATA GCAAATAGAC TTTTAAAGAG AGTGAGAGAT TTTGCAGAAG TTTTATATGA TAATGAAATT ACAGAAGAGG CTGCAAAAAA ATCCTTAGAG ATTTTAGAAG TTGATGGAGA AGGTTTTGAT AGAATTGATA ATAAAATTCT AGAAGCCATA ATAGATAACT TCAATGGAGG ACCAGTAGGG ATAGAAACCT TAGCTTACTT CGTTGGAGAG GAATTAGATA CTATAGAAGA TGTTTATGAG CCATATCTTC TACAAAAAGG GTTTATAGTT AGAACTCCAA GGGGAAGAAT GGCAACAGAT AAAGCGTATA AACACTTAGG AAGAGTTAGA TTTAATGAAT CTAAGATAGA TTCTAAACAG TGTACGTTAT TTGAAAAATA A
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Protein sequence | MSERLVTSNE IGIDSTNEYS LRPEKINEYI GQDKVKERLN IFIKAAQRRG EALDHVILYG PPGLGKTTLA NIIANEMGGN LKITSGPAIE RAGDLAAILT TLNTNDVLFI DEIHRLNRSV EEILYPAMED YVLDIIIGKG AASKSIRLDL PKFTLIGATT RIGMLSSPLR DRFGVLCSME YYTDEQLKEI IIRSAEILGC HITEEGAFEI AKRSRGTPRI ANRLLKRVRD FAEVLYDNEI TEEAAKKSLE ILEVDGEGFD RIDNKILEAI IDNFNGGPVG IETLAYFVGE ELDTIEDVYE PYLLQKGFIV RTPRGRMATD KAYKHLGRVR FNESKIDSKQ CTLFEK
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