Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1900 |
Symbol | hisS |
ID | 4205504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2098173 |
End bp | 2099420 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642566450 |
Product | histidyl-tRNA synthetase |
Protein accession | YP_699210 |
Protein GI | 110802627 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0124] Histidyl-tRNA synthetase |
TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGATAC AAGCTCAAAA GGGTACAAAG GATATGTTAC CTAATGACGC TTATAAATGG CATTATATAG AAGAAAAGTT AAGAAAAATA TCAGCTGAAT ATGGAATTAG AGAGATTAGA ACTCCTATGT TTGAGGCAAC TGAACTTTTC AAAAGAGGAG TTGGAGAAAC TACTGACGTG GTTCAAAAGG AAATGTATAC TTTTGAAGAC AAAGGTGGAA GAAGCATAAC TCTTAAACCA GAGGGGACAG CTCCAGCTGT TAGAGCATTT ATTGAAAATA GTTTATATGC TGATGCTCAG CCAACAAAAA TGTTCTATTT TACTCCATGC TTTAGATATG AAAAAATGCA AAAAGGAAGA TTAAGAGAAT TCCATCAATA TGGAATAGAA GTTTTTGGTT CACAAGAAGC TTCTATTGAT GCAGAAATCT TATCTTTAGT TATGAGAGCA TTAACAGAGG ATTTTGGAAT AAAAGGATTA AGCTTAAATA TAAACAGTTT AGGATGTCCA AAATGTAGAG CAAAATTCAA TGAAGCTTTA AAACAATATT TAAAAGAGAA CTATGATAAT CTTTGTGAAA CTTGTAAAAC AAGATTTGAA AAGAATCCTA TGAGAATCAT AGACTGTAAA GAAAAGAGAT GTAAGGAAAT AGTTAAGGAA GCTCCTTCAA TACTAGATTA CATCTGCGAA GAGTGCAGTG ATCACTTTAG CAAGTTAAAA GCTTACTTAG ATGTTATGGG AATAGAATAT AACATAGATC CACAAATAGT AAGAGGATTA GATTACTATA GTAAAACTGT TTTTGAAGTT ATAAAAGATG GATTAACAGT TTGTGGTGGA GGAAGATATG ATTATCTAGT AGAAGAAGTA GATGGTCCTA AAACTCCAGC TATGGGATTT GGATTAGGTT TAGAAAGACT TCTTTTAATA TTAGATGAAG AAGGAATAGA AATTCCTGAG CCTGTTAGAT GCGAAGTTTA TATTGGATCA ATGGGAGATA GGGCTAAGCT TGAAGCTATG AAATTAGCAT TTAATCTTAG AAAATCTGGT ATTAAGGCTG AAATAGATCA CTTAGGAAAG AGTGTTAAGG CTCAAATGAA GTATGCTAAT AAAATAGGAG CTAAATATAC TTTTGTTATA GGTGACTCTG AAATAGAAGA AAACAAAATT AAAATTAAGA GAATGAGCGA TGGAGAACAA TTCGAAGTCA GCTTAGATAT AAATGAAATA GTAAATATAG TTAAGTAG
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Protein sequence | MAIQAQKGTK DMLPNDAYKW HYIEEKLRKI SAEYGIREIR TPMFEATELF KRGVGETTDV VQKEMYTFED KGGRSITLKP EGTAPAVRAF IENSLYADAQ PTKMFYFTPC FRYEKMQKGR LREFHQYGIE VFGSQEASID AEILSLVMRA LTEDFGIKGL SLNINSLGCP KCRAKFNEAL KQYLKENYDN LCETCKTRFE KNPMRIIDCK EKRCKEIVKE APSILDYICE ECSDHFSKLK AYLDVMGIEY NIDPQIVRGL DYYSKTVFEV IKDGLTVCGG GRYDYLVEEV DGPKTPAMGF GLGLERLLLI LDEEGIEIPE PVRCEVYIGS MGDRAKLEAM KLAFNLRKSG IKAEIDHLGK SVKAQMKYAN KIGAKYTFVI GDSEIEENKI KIKRMSDGEQ FEVSLDINEI VNIVK
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