| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1894 |
|---|
| Symbol | |
|---|
| ID | 4205682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 2091867 |
|---|
| End bp | 2092829 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 642566444 |
|---|
| Product | dipeptidase family protein |
|---|
| Protein accession | YP_699204 |
|---|
| Protein GI | 110803325 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTT TTATGAAATT TATAGATTTT CATTGTGATA CAGCATCACG TATGCTTCAA
GAAAATAAAA AGCTTTTTAG AAATGATTTG AAGGTTGATA TAAATAAATT AAGAGAAGGA
GAGGCTTTAG CACAATTTTT TGCTTTGTTT ATAAATAAAG AATGTAATTT TGATACTTAT
TCTTATTGCA AAGAAATGCT ACAGAATTTT AAAAGAGAAA TAAATGAGAA TTCAATAGAT
ATAGTCTTAT GCAGAAATAT AAGTGATTTA GAAAAGGCAG AGAAAGACGG TAAAATAGGG
GCTTTTATAA CTATTGAAGA GGGAGATGCA ATTAAGGGTG ATATTGAAAA GTTAAGGGAG
TTTAAAGAAG AGGGAGTTTC TTTAATAACC TTAACTTGGA ATTATATAAA TGACTTAGGA
TATCCAAATT ATGAGTTTAA ATACAAGGAT AAGGGTCTTA CTAAAAAGGG TATAGAAGTT
GTGGAAGAAA TGAATAATCT AGGAATGTTA ATAGATGTTT CTCATCTTTC TGATGGAGGA
TTTTATGATG CAATAAAATA TTCAAAGAGT CCAATTATAG CATCTCATTC TAATAGTAGA
ACAAAGACTA ATCATAGCAG AAATTTAACT GACCATATGA TTAAAGAGTT AGCTAATAAT
GGTGGAGTAA CAGGAATAAA TTTTTGCAAT GCTTTCTTAA AAGAAGAGTG GGAAGAGGAT
TTAAATTTAG CTTCCATAAG AAATATGGTT AGACATATAA AACACATAAG AAATATTGGG
GGAATAGATG TTATTTCCTT AGGATCTGAT TTTGATGGTA TAGAAAATGA AGTTGAAGTT
AAAGATTCAA GTAAGATGAA TTTATTATTA AATGCTTTGG AGATTGAAGG ATTTAAAGGT
GAGGAAATAG AGAAAATATA TTATAAGAAT GCAAAGAGAA TAATAAGAGA TGTTTTAAGA
TAG
|
|---|
| Protein sequence | MKIFMKFIDF HCDTASRMLQ ENKKLFRNDL KVDINKLREG EALAQFFALF INKECNFDTY
SYCKEMLQNF KREINENSID IVLCRNISDL EKAEKDGKIG AFITIEEGDA IKGDIEKLRE
FKEEGVSLIT LTWNYINDLG YPNYEFKYKD KGLTKKGIEV VEEMNNLGML IDVSHLSDGG
FYDAIKYSKS PIIASHSNSR TKTNHSRNLT DHMIKELANN GGVTGINFCN AFLKEEWEED
LNLASIRNMV RHIKHIRNIG GIDVISLGSD FDGIENEVEV KDSSKMNLLL NALEIEGFKG
EEIEKIYYKN AKRIIRDVLR
|
|---|
| |