| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1881 |
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| Symbol | |
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| ID | 4205039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 2075279 |
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| End bp | 2076661 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 642566431 |
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| Product | cell envelope-related function transcriptional attenuator |
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| Protein accession | YP_699191 |
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| Protein GI | 110803230 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.723477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAAAA AGAAATATTT TAATTTTAGT AAAAAACAAA AAATAATTAT ATTTTCTTTC
TTAACTATAA TTATTTTAAT CGCATCTATA GTAAGCTTTT TTGTTTTTAG ATTTTACACC
CACTCCTACG AAGGAAGTAA TGATCCTGCT AAAGTTAATA CTGTAGATGA AGATATTAAA
TTTAAAGAAG TTCCAGGAAT AACAAATATT CTTTTGCTTA GTAGCGATGC TAGACCTGGA
GAAAATGTCT CTAGATCAGA TTCCATAATG ATCTTAACAA TAGATAATAT CAATAAAAAA
TTAAAAGTAA CTTCTTTAAT GAGAGATATG TTAGTAAAAA TAGATGGTCA TGGAGAAGAA
AAATTAAATC ATGCTTTTGC TTATGGTGGT CCTACTAAAA CAATTGAAAC TATTCAAAAT
AATTTCGGAA TAAAATTAAA TAATTATGTA ATTGTAGATT TTAATGCTTT TGTTAAAGTT
ATAGATGCTA TAAACGGAAT TGAAGTAACC GTTAAAGATT ATGAACTTGA TGAACTTAAT
AAATATATTT TAGATGGTGG CGGTTCTGAA AAAGATTTAC TTCCTTCATC TGGAACTTAT
AATCTTAATG GTTATCAAGC CTTATCTTAT GCTAGAATTA GAAAAGTTGG TAATGGTGAA
TATGAAAGAA CTGAAAGACA GAGAGCTGTT CTTCAAATTG CTTTAGAAAA AATTAAAGAT
ATGTCAAAAG TTAAAATTGT TTCTCTGCTT AATGAATTAT TCCCATATGT TAAAACTAAT
ATTTCTTTAG GAAATGCTAT GGATTATGGA TTTACAGCTT TAAATGTAGG TAAAAAGTGT
AACTTTAAAA TAGAGCAATT CAGAGTTCCT CTAGATAGTA TTTCAAAAGG TGGAATCATT
AATAATAAAG GTTGGGTCTT TGTTATTGAT AAGGTAGAAA CATCAAAGGC TCTTAAAGAG
TTCATCTTTA ATGACAATAA AAATTATGAG CCTGATACTA GTAATTTTGA CTCTATAATA
GAACAATACT TTAATGACTA TGATATTAAA GATGATACTA CTCACCCAGA TTATGAATAT
GTACCTATTA TAAACACTAA TGGCAACTTT GAAAATTCTA AAAACAATTT AAATACTAGC
AGTAATAATA ATTCTAATGA TAAAGTAGAA AAATCATCTA ACCAAGGAAG CAATGAAAAT
TCTTCTAATA AACCAAGTAG TGGAAGCACT TCTACTAGTA ATAATTTTAC AGAAAAACCA
AACACTTCTC AAGAAACTTC AAAACCATCT GAAAATAATG GAGATAGTGG AAATATAGAT
TCCTCCAACA CTCCCTCTAT TGATGGAAAT GCTTCTTCTG AGAATAATAC GGAAGTAAAT
TAA
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| Protein sequence | MDKKKYFNFS KKQKIIIFSF LTIIILIASI VSFFVFRFYT HSYEGSNDPA KVNTVDEDIK
FKEVPGITNI LLLSSDARPG ENVSRSDSIM ILTIDNINKK LKVTSLMRDM LVKIDGHGEE
KLNHAFAYGG PTKTIETIQN NFGIKLNNYV IVDFNAFVKV IDAINGIEVT VKDYELDELN
KYILDGGGSE KDLLPSSGTY NLNGYQALSY ARIRKVGNGE YERTERQRAV LQIALEKIKD
MSKVKIVSLL NELFPYVKTN ISLGNAMDYG FTALNVGKKC NFKIEQFRVP LDSISKGGII
NNKGWVFVID KVETSKALKE FIFNDNKNYE PDTSNFDSII EQYFNDYDIK DDTTHPDYEY
VPIINTNGNF ENSKNNLNTS SNNNSNDKVE KSSNQGSNEN SSNKPSSGST STSNNFTEKP
NTSQETSKPS ENNGDSGNID SSNTPSIDGN ASSENNTEVN
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