Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1839 |
Symbol | tagA |
ID | 4204705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2029884 |
End bp | 2030600 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642566389 |
Product | teichoic acid biosynthesis protein A |
Protein accession | YP_699153 |
Protein GI | 110802919 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1922] Teichoic acid biosynthesis proteins |
TIGRFAM ID | [TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000116164 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATAAGG AGTTATTAGG ATATAAAATA TTTTCAGATA ATAAAGAGGA ACTTTTAAAA GAGATTGAAA ATAAAAAAAG AGTTAACATA ATATCTGGAA ATCCAGAGGT TTTATATAAT GGTATAAAGA ATGAATTTTT AAAAAATAGC TTTACTAAAG AGGATGCTTT AATAATTCCA GATGGAGTAG GAACTCTGCT TGCAGCTAAG ATTAATGGAA TAGATATCAC AGAAAAAATA GCTGGCATTG AAGTTATGAA TATGCTTTTA GAGGAAGCTA GAGATAAGAA TTTAAAAGTG TTTTTATTAG GAGCTAAGGA AGAGATACTA ATTAAATGCA AGGAAAAAAT AAAAGAAAGC TATGATGGAA TTGATATAGT TGGAAGTAAT AATGGCTTTT TTGATTTAGA TAATTGTGAT GATTTAATAG AAAAAATTAA TGAAAGCAAG GCTGATATAC TTTTTGTTGC CATGGGAGCG CCTAGACAAG AAGTCTTTAT AGAGAAATAT AAGGATAAAC TTTGTTGCAA GATTTTTATG GGTGTTGGTG GAAGTTTTGA TGTGTTTGCT GGAAATGTAA ATAGAGCACC ACAATTTATG ATTAATATAG GTATGGAGTG GCTTTATAGA GTGGCTAAAG AGCCTTGGAG AATAAAAAGA TTAGGTAGCA TACCAAAGTT CTTAGTTTTA TCAATTAAGG AAAGAGGTAA AAGATAA
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Protein sequence | MYKELLGYKI FSDNKEELLK EIENKKRVNI ISGNPEVLYN GIKNEFLKNS FTKEDALIIP DGVGTLLAAK INGIDITEKI AGIEVMNMLL EEARDKNLKV FLLGAKEEIL IKCKEKIKES YDGIDIVGSN NGFFDLDNCD DLIEKINESK ADILFVAMGA PRQEVFIEKY KDKLCCKIFM GVGGSFDVFA GNVNRAPQFM INIGMEWLYR VAKEPWRIKR LGSIPKFLVL SIKERGKR
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