Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1808 |
Symbol | |
ID | 4205787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2000443 |
End bp | 2000814 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 642566358 |
Product | hypothetical protein |
Protein accession | YP_699123 |
Protein GI | 110802569 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00659836 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGATTTTTT ATGTTAAGGA ATATAAGAGA TTTATTCCAA AAGAGAAAGA ATTAAACTAC TTGTTGGATG CAGAAATGTA CTTAAATCAC AGGTTTTGGG ATAATATGGT TGAAGATATA AAGATAAATA AAGACAAAAA CTATATTTTA GTGAAATTTT GGAGAGATGG TATAGTAGCA GAAGATAAAA TAGAGAAAAT AAAAAATAAA CTATATGTTT ATTATAATTA TACAGGATAT GGACGAAATT ACTCACCTGC ACTCATAGAA GATGTTGAAG AATTTGATTT GATGGAAAAA GGAAACTTAT TTTATATAAA ATTAAAATTT AAAAATCAAG AGGAGAGGGT CTATTGTTAT GAAAAGGCGT AA
|
Protein sequence | MIFYVKEYKR FIPKEKELNY LLDAEMYLNH RFWDNMVEDI KINKDKNYIL VKFWRDGIVA EDKIEKIKNK LYVYYNYTGY GRNYSPALIE DVEEFDLMEK GNLFYIKLKF KNQEERVYCY EKA
|
| |