Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1793 |
Symbol | asp |
ID | 4206439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1991653 |
End bp | 1992042 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642566343 |
Product | alkaline shock protein |
Protein accession | YP_699108 |
Protein GI | 110802660 |
COG category | [S] Function unknown |
COG ID | [COG1302] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0585534 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGAAA TGAATAGAGA TGAAGCTAAC TTAGGTATAG TTAATATATC TGATGAAGTT ATCGGTGTCG TAGCTGGTAT AGCTGCATCT GAGATAGACG GAATACTTGA GATAAATCAC AATAATAGCA CTGGAATAGG ACATAAATTT TCAAAGAAAA GTTTAGGTAA GGGCATTAAG GTTAATGTGG AGAATGGTGA AGCAGTTATA GAAATTGGTG TTACTGTTCA ATACGGAATT AAGATCCCTG ATGTAGTTTC TCAAGTGCAG GAAAACGTAA GAAGGACTGT TGAAGCTATA ACTGGACTTA AGGTGGCACT AGTGAACATA TATGTGCAAA ACATAATTAT CTTAAAAGAA GAAGATAAAA ATGAAATATT AAAAAAATAG
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Protein sequence | MNEMNRDEAN LGIVNISDEV IGVVAGIAAS EIDGILEINH NNSTGIGHKF SKKSLGKGIK VNVENGEAVI EIGVTVQYGI KIPDVVSQVQ ENVRRTVEAI TGLKVALVNI YVQNIIILKE EDKNEILKK
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