Gene CPR_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1772 
Symbol 
ID4206432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp1971540 
End bp1971959 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content33% 
IMG OID642566322 
Producthypothetical protein 
Protein accessionYP_699087 
Protein GI110802653 
COG category[S] Function unknown 
COG ID[COG3874] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02874] sporulation protein YtfJ 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAACT CAAATCACCC AATAGAAAAT CTAATGGGTA CAACAATGGA AAACATAAGA 
GACATGATAG ATGTTAATAC TGTAGTTGGA GATGCCATAG AAACTAGAGA TGGAAGTTAC
ATAATTCCAA TATCAAAAGT TTCCTTTGGA TTTGCTTCAG GAGGCTCAGA ACTTCCAAAT
AAAGAATGTG AAAAAATAGA TGATAGATTT GCCTTTGGTG GGGGTTCTGG CGCTGGTGTT
AGTGTAAAGC CAGTTGCTTT CTTAGTTCTT AAAGGTGATT CTGTAAGGCT ATTGCCTGTA
AACCAAACTA ATACTTATGA CAGAATAGTT GATAATATTC CTCAGATAAT TGAAATATTT
AAGGATATGG GCAATAAAAA GTGTAAAGAC AAAAAAGAAG ATTCTAATTT TTGTGATTAA
 
Protein sequence
MINSNHPIEN LMGTTMENIR DMIDVNTVVG DAIETRDGSY IIPISKVSFG FASGGSELPN 
KECEKIDDRF AFGGGSGAGV SVKPVAFLVL KGDSVRLLPV NQTNTYDRIV DNIPQIIEIF
KDMGNKKCKD KKEDSNFCD