Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1744 |
Symbol | typA |
ID | 4206595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1941642 |
End bp | 1943474 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642566294 |
Product | GTP-binding protein TypA |
Protein accession | YP_699059 |
Protein GI | 110801825 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAACG AATTTACAAG AAATGATATT AGAAATATAG CTATAATCGC TCACGTTGAC CATGGTAAAA CAACTTTAGT GGATGCATTA TTAAGACAAA GTAATGTTTT TAGAACAAAC GAAAAAGTAG AAGAGAGAGT AATGGACTCA AATGACTTAG AAAAAGAAAG AGGTATTACA ATACTTTCAA AAAATACAGC AGTTCATTAT GACGGGGTTA AAATAAATAT AATAGATACA CCAGGACACG CTGATTTCGG AGGAGAGGTT GAACGTGTAC TTAAAATGGT AGAAAGTGTT TTACTTGTAG TAGACTCATA TGAAGGGGCT ATGCCACAAA CAAAATTCGT TTTAAGAAAA GCTCTTGAGT TAGGATTAAA ACCAATAGTT GTTATAAACA AAATAGATAA ACCAGATGCT AGACCAGAAG AAGTTATTGA CGAAATATTT GAATTATTCT TAGAGCTTGG TGCAGATGAT GAGCAATTAG ATTTCCCAAT AGTTTATGCT TCAGCTAGAG ATGGAGTTGC TACAATTAAT ATAGATGAGC CAAAAGATAA CATGAAAGAC CTATTCGATA CTATAATCGA AAAAGTTGAA TCACCAAAGG GATCTATAGA AGATAGCTTG CAAATGTTAG TTACAACTTT AGATTCAAGT GAATATGTTG GTAAAATAGC TATAGGTAAA ATAACTAGAG GAGTAGCTAA GAAAAACCAA CAAGCTGCTG TTGTAAGACA AGATGGAACA GTAAATAAAT TCAAAATATC AAGTCTTTAT ACTCATGATG GATTAAAGAG AATAGAGGTT GAGGAAGCAC AATTAGGAGA TATAGTTGCA ATAAGTGGTA TATCTGACGT AAATATTGGA GAAACTATAA CAGATGCACA AAATCCAGAA GGATTACCAT TTGTTAAAAT AGACGAGCCT ACATTAAACA TGAACTTTAT GGTTAATGAC TCACCATTTG CTGGTAGAGA AGGGGATTTC GTAACTTCAA GACATTTAAG AGATAGATTA TTAAAGGAAT TAGAAACTAA CGTAAGTTTA AAAGTTAAAG AAATAACTCC AGATTGTTTC GAAGTAAGTG GTAGAGGAGA GCTACATCTT TCAATACTTA TAGAAACAAT GAGAAGAGAA GGATATGAAT TCCAAGTTTC TAAGCCAAAC GTTATAACAA AAATAGATGA AAATGGTGTT AAGGTTGAAC CAATAGAGCA CTTAACTATA GACGTTCCAG AAGAATTTAT GGGACCTGTT ATGGAAAAAT TAGGACCTAG AAAAGCTGAA ATGGTAAATA TGACTTCAGC TGTTAATGGA TACTCAAGAT TAGAGTTCAA AATACCTGCA AGAGGACTTA TAGGATTTAG AAATGAATTC ATGACAGATA CAAAAGGTAA CGGAATAATG AACCATGTAT TTGATGGATT TGAAAAATAC AAAGGAGAGA TCCCAGGAAG AAGTAGAGGA TCAATCGTAG TATTTGAATC AGGAGAAGCA GTTACATATG GATTATTTAA TGCTCAAGAA AGAGGAACTT TATTCATAGA GCCAGGTACA GAAGTTTATG CTGGAATGGT TTGTGGAGAA TGTTCAAGAG CAGATGACAT AGACGTTAAT ATTTGTAAGA AGAAACAATT AACTAATACA AGATCATCTG GAGCTGATGA TGCTTTAAAA TTAACTCCAG TAAGACAAAT GTCATTAGAG CAATGTTTAG AATTCATAAA CAATGACGAA TTAGTTGAAG TTACTCCAGT AAATGTAAGA ATGAGAAAGA GAATCTTAGA CAGTGCTGAG AGAAAGAGAG CTATAAATAG AAGTAAAAAA TAA
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Protein sequence | MSNEFTRNDI RNIAIIAHVD HGKTTLVDAL LRQSNVFRTN EKVEERVMDS NDLEKERGIT ILSKNTAVHY DGVKINIIDT PGHADFGGEV ERVLKMVESV LLVVDSYEGA MPQTKFVLRK ALELGLKPIV VINKIDKPDA RPEEVIDEIF ELFLELGADD EQLDFPIVYA SARDGVATIN IDEPKDNMKD LFDTIIEKVE SPKGSIEDSL QMLVTTLDSS EYVGKIAIGK ITRGVAKKNQ QAAVVRQDGT VNKFKISSLY THDGLKRIEV EEAQLGDIVA ISGISDVNIG ETITDAQNPE GLPFVKIDEP TLNMNFMVND SPFAGREGDF VTSRHLRDRL LKELETNVSL KVKEITPDCF EVSGRGELHL SILIETMRRE GYEFQVSKPN VITKIDENGV KVEPIEHLTI DVPEEFMGPV MEKLGPRKAE MVNMTSAVNG YSRLEFKIPA RGLIGFRNEF MTDTKGNGIM NHVFDGFEKY KGEIPGRSRG SIVVFESGEA VTYGLFNAQE RGTLFIEPGT EVYAGMVCGE CSRADDIDVN ICKKKQLTNT RSSGADDALK LTPVRQMSLE QCLEFINNDE LVEVTPVNVR MRKRILDSAE RKRAINRSKK
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