Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1724 |
Symbol | spoIVA |
ID | 4205401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1919614 |
End bp | 1921089 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642566274 |
Product | stage IV sporulation protein A |
Protein accession | YP_699039 |
Protein GI | 110802136 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02836] stage IV sporulation protein A |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0919128 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAGATT TCAATATATA CAAAGATATA GCAGAAAGAA CACAGGGAGA TATTTATGTT GGAGTTGTTG GGCCAGTAAG AACAGGTAAA TCTACATTTA TAAAAAGATT TATGGACTTA ATGGTAATAC CTAAGATTGA TAATGCTTAC AAAAAGGAAA GAGCAAAGGA TGAATTACCA CAAAGTGGAT CAGGAAAAAC TATTCATACA ACAGAGCCTA AATTTGTACC TAATGAGGCA GTAGAAATTG CTTTAGATGA TGGCATTAAG TTTAGTGTGA GAATGGTTGA TTGTGTTGGA TACATTGTTA AAGGGGCTAA TGGTTATTTT GATGATGGAG AATCTAAAAA AGTTCATACT CCTTGGTTTG ACTATGAAAT TCCATTTGAA GATGCAGCAG AGATAGGAAC TAGAAAAGTA ATAACAGACC ATTCAACAAT AGGATTAGTA GTTACTACAG ATGGAAGTAT AACTGGTATA GATAGGGATG ATTACTTAGA TGCTGAAGAA AGAGTTGTAG CTGAGTTAAA ATCAATAGAC AAACCTTTTA TAATTGTACT TAATTCATTA GATCCAAGGG CAGAAGAGAC TTTAGACTTA AAACAAGAAT TAGAAATCAG ATATGGAGTT CCAGTTCAAA TAATGGATGT AGCCAATATG AATGAAAATG ACATAAACGA TTTATTTACA AAAGTACTTA AAGAATTTCC AGTTAAGGAA ATTAATATAG ACATGCCAAA ATGGATTGAA AAATTAGAGC CTTCTCATTG GTTAAAATCT AATTTTATAG ACATAGTTAA AGACATGTGT AAAAACATAT CAAAAATTAG AGACGTTAAG GATCTACTTA GTACTTATGG AGAAGATTTC TTAGGGGTAG CAGATATAAG TGAGATGAAT TTAGGGGATG GAACTGTAAG AGTTAAAATG ACTCCTAAAA ATGGTATCTT CTATAAAATA ATAAGTGAAA TGTGTGATGA AGAATTAAAT GATGAAAGTG ATTTAATAGC TTTAATCAAA GATTTGCATA AAGCAAAATC TGAATATGAT AAGGTAGCTG AAGCAATAAA TAGTGTTAAG GAAACAGGTT ATGGACTAGT TGCTCCGCAA TTATCAGAAA TGAAGTTTGA AAAACCAGAT ATTGATAAGC AAGGTTCAAA ATATGTTGTA AAACTTAAGG CTAGTGCTCC TAGTCTTCAC TTAATAAAAG CAGATATTCA AACAGAAATT TGCCCAATAA TGGGAACTGA AAAAGAAACT CAAGAGGTAT TTAAAACATT ACTTGAGCAA TTTGAAAGCG ATCCGGAAAA ATTATGGCAA AGCAATATGT TTGGCAAGTC CTTAGAGACA TTAGTTCAAG AAGGTTTAAG AAGTAAACTT TATAAGATGC CAGATGATAT TCAAAGCAAG ATTCAAAAAA CTCTTCAAAG AATCATTAAT GAAGGGGAAG GAAATTTAAT CTGTATTATT TTCTAA
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Protein sequence | MEDFNIYKDI AERTQGDIYV GVVGPVRTGK STFIKRFMDL MVIPKIDNAY KKERAKDELP QSGSGKTIHT TEPKFVPNEA VEIALDDGIK FSVRMVDCVG YIVKGANGYF DDGESKKVHT PWFDYEIPFE DAAEIGTRKV ITDHSTIGLV VTTDGSITGI DRDDYLDAEE RVVAELKSID KPFIIVLNSL DPRAEETLDL KQELEIRYGV PVQIMDVANM NENDINDLFT KVLKEFPVKE INIDMPKWIE KLEPSHWLKS NFIDIVKDMC KNISKIRDVK DLLSTYGEDF LGVADISEMN LGDGTVRVKM TPKNGIFYKI ISEMCDEELN DESDLIALIK DLHKAKSEYD KVAEAINSVK ETGYGLVAPQ LSEMKFEKPD IDKQGSKYVV KLKASAPSLH LIKADIQTEI CPIMGTEKET QEVFKTLLEQ FESDPEKLWQ SNMFGKSLET LVQEGLRSKL YKMPDDIQSK IQKTLQRIIN EGEGNLICII F
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