| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1716 |
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| Symbol | priA |
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| ID | 4205922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1910977 |
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| End bp | 1913172 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 642566266 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_699031 |
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| Protein GI | 110803982 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAGAAAT TTGCTGAAGT AATTGTAAAT AGTGAAGCTG TTACAATTGA TAAGCCTTTT
ACATATAAGA TTAAAGAAGA TTTAGTTCAT AATATAAAGG TTGGACATAG AGTTTTAATT
CCTTTTGGAA ATGGAAATAA AAAAATTGAA GGTTTTGTTT TAAAAATATT AGATAATGTT
GAAAATAAAA GTATAAGATA TAAATCTATA TATAATGTTT GTGATAATGA ACCCTTATTA
AGTGAAGATT CTTTAAAGCT TGTTAAATTT TTAAGAGAAA AATATTTATG TAAGTATATA
GATGCTATAA GAGTTATGAT TCCACCTAAA ATAATGAGTG GAAATAAGGA GAAAACAAAA
CAAGTTATAG TATTTAAAAA ATATATAGAA GAATTAAGTG AGCCACAAAA AAGAGCTTTA
GAGCTAATTG AAGAAAAAAG TGGTGGTTTT ACAAAAGCAG AATGGAATAA AATTTTTAAT
ATATCAACAT ATATGATAAA TAAATTAATA GAATTAGGTT GTGTTTCTAG TAAAGAAGTA
AGGGTTGGAA GGGAAAATTT AAGAGAGTTT AAGCCTTATC CGCCTAAGAG TTTAAATGAA
GAACAGATAA GAGCATATGA TACAATTTTA GAAAGTGATA AAAATATATT TTTATTAAAG
GGCGTAACTG GAAGTGGAAA AACAGAAGTA TATATGAATT TAGTTAGTTA TATGCTCCTT
GTTGAAAAGA GTTCATTAAT ATTAGTACCA GAAATAGCTC TAACTCCTCA AATGATTGAA
AGATTTAAAG GAAGATTTGG AAAAGATGTA GCGGTCTTTC ATAGTAGGCT TTCAGATGGA
GAGAGATATG ATGAATGGTA TAGGGTTAAA AATGATCAAG TTAAGGTTGT TATAGGGGCA
AGATCCGCTA TATTTTTACC CTTTAATGAT TTAGGACTAA TAGTAGTGGA TGAAGAACAT
GAAAGTAGTT ATAAATCAGA TATGAATCCT AAATATAATA CTATAGAAGT TTGTGAGTAT
TTAAGTGTTC TAAAAAATTG TAAGGTTGTT TTAGGTTCAG CAACTCCTAG TGTTGTTAGT
TTTTATAAAG CACTTAAAGG GAATTATGAA TTAATTGAAC TTAAAAAGAG AGTTAATAAT
TTAGAACTTC CTAATGTATC TATTGTGGAT ATGAGGGAAG AGCTAAAATC AAATAATAAA
ACAATGTTTA GTAGGGATTT ATATTTAAAG ATAAAAGATA GATTAGAGAA AAAAGAACAA
ATAATTTTGT TTTTAAATAG AAGAGGATTT TCATCCTTTG TTTCTTGTAG AAGTTGTGGA
TTTGTTTTTA AATGTAACAA TTGTGACATA TCAATGACTT ATCATAATAA TGGATACTTA
GTTTGTCATT ATTGTGGAAA TACTGAAAAG ATGCCTAAGC TTTGCCCTAA GTGTGGTAGT
AACTATGTTA AACATTTTGG GGTAGGAACA GAAAAATTAG AGGAAGCAGT ACATCATCAT
TTTAAAGAAG CAAAGGTTTT AAGGATGGAT GTAGATACAA CAAGAAAGAA AAATTCTCAT
GAGGAAATTT ATAACTCATT TAAAAGTAAA GAAGCAGATA TATTAATAGG AACTCAGATG
ATAGCTAAAG GGCTTGATTT CCCAGATGTA ACCTTAGTTG GAGTTATGGC TGCAGATATG
TCTTTAAATT TACCAGATTA TAAGTCTAGT GAAAAGACAT TTCAACTTAT AACTCAGGTA
AGTGGTAGAG CAGGACGTGG TGATAAAAAG GGAGATGTAA TAATTCAAAG TTATTCTCCA
GAACATTATG CTTTGACCTG TGCAAGGGAT AATAATTATG AAGAGTTCTT TAAAAGAGAA
ATAAATTTAA GAAAACTTAT GGCATATCCA CCCTTTGATG ATTTGTTTTT AATAAACTTA
AGTGCAAAGG GAGAAATAAA AGTAAAGATT TTTGCAAAAA AATTAGAGGC GTATTTACGT
AATATATTAA AAGAATATGA TAATATATTT ATATACGAAG CATGCCCTTG TTCTATAAGT
AAAATAAAAA ATGTTTATAG ATGGCAAATT CTAATTAAGG GAAAATTAGA TTTAGAGGTA
TGCTCTAAAA TAAAAAAAGG GGTTTATGAA TTATCCAAAG ATGTTTATAA TGAGATTAAG
ATTGGTTTAG ATATAAATCC TAATAGCTTA ATGTAA
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| Protein sequence | MEKFAEVIVN SEAVTIDKPF TYKIKEDLVH NIKVGHRVLI PFGNGNKKIE GFVLKILDNV
ENKSIRYKSI YNVCDNEPLL SEDSLKLVKF LREKYLCKYI DAIRVMIPPK IMSGNKEKTK
QVIVFKKYIE ELSEPQKRAL ELIEEKSGGF TKAEWNKIFN ISTYMINKLI ELGCVSSKEV
RVGRENLREF KPYPPKSLNE EQIRAYDTIL ESDKNIFLLK GVTGSGKTEV YMNLVSYMLL
VEKSSLILVP EIALTPQMIE RFKGRFGKDV AVFHSRLSDG ERYDEWYRVK NDQVKVVIGA
RSAIFLPFND LGLIVVDEEH ESSYKSDMNP KYNTIEVCEY LSVLKNCKVV LGSATPSVVS
FYKALKGNYE LIELKKRVNN LELPNVSIVD MREELKSNNK TMFSRDLYLK IKDRLEKKEQ
IILFLNRRGF SSFVSCRSCG FVFKCNNCDI SMTYHNNGYL VCHYCGNTEK MPKLCPKCGS
NYVKHFGVGT EKLEEAVHHH FKEAKVLRMD VDTTRKKNSH EEIYNSFKSK EADILIGTQM
IAKGLDFPDV TLVGVMAADM SLNLPDYKSS EKTFQLITQV SGRAGRGDKK GDVIIQSYSP
EHYALTCARD NNYEEFFKRE INLRKLMAYP PFDDLFLINL SAKGEIKVKI FAKKLEAYLR
NILKEYDNIF IYEACPCSIS KIKNVYRWQI LIKGKLDLEV CSKIKKGVYE LSKDVYNEIK
IGLDINPNSL M
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