| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1700 |
|---|
| Symbol | coaD |
|---|
| ID | 4205571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 1895252 |
|---|
| End bp | 1895746 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 642566250 |
|---|
| Product | phosphopantetheine adenylyltransferase |
|---|
| Protein accession | YP_699015 |
|---|
| Protein GI | 110802807 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0669] Phosphopantetheine adenylyltransferase |
|---|
| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR01510] pantetheine-phosphate adenylyltransferase, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.880065 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGTAG GGGTTTATCC AGGAAGTTTT GACCCTATTA CTAAAGGACA TCTAGATCTT
ATTGAAAGAG CGGCAAGTAA ATTTGATAAG GTCATAGTTG CTGTTCTTAT AAACATAAAT
AAAAAAGGTA TGTTTTCTAT AGAAGAAAGG GTTAATCTTA TAGAGAAGTG CGTTGCAAAA
TACAATAATG TTGAGGTTAA AAGTTTTAAT GGACTTTTAA TTGATTTTGT GAGAAAAGAA
AAAGCTGATG TAATAATAAA AGGTTTAAGA TCAGTTACTG ATTTTGAATA TGAATTCCAA
ATGGCACTTA TGAACAGAGA GTTAGCAAAT GAGGTTGAAA CTGTATTTAT GGTTACAAGC
CCTAATTACT CTTATATAAG CTCGTCTGCA ATAAAACAGG TTGCAAGTTT TAGTGGAGAA
ATAAAAAACT TTGTTCCAAA AGAGATAGTA GAGGATTTAG AAGAAAGGAT TATTAGTTTA
AGAGGGGAGG GATAA
|
|---|
| Protein sequence | MRVGVYPGSF DPITKGHLDL IERAASKFDK VIVAVLININ KKGMFSIEER VNLIEKCVAK
YNNVEVKSFN GLLIDFVRKE KADVIIKGLR SVTDFEYEFQ MALMNRELAN EVETVFMVTS
PNYSYISSSA IKQVASFSGE IKNFVPKEIV EDLEERIISL RGEG
|
|---|
| |