Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1692 |
Symbol | plsX |
ID | 4205834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1887887 |
End bp | 1888906 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642566242 |
Product | putative glycerol-3-phosphate acyltransferase PlsX |
Protein accession | YP_699007 |
Protein GI | 110803571 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00846785 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATTG CTGTAGATGG AATGGGGGGA GATCATTCCC CAAGTGCAGT AGTTGAAGGT TGTGTTCAGG CATTAGAGGA ATTTAAGGAT ATAGAAATAT ATATAACTGG ACCAGAAGAT CTTTTAAAAG AGGCTTTTTC TAAGTTTAAA TATGACAAAG AAAGAGTTAT TTTTATAGAT GCTAAAGAAG TGATAAGTAC TAATGAGCAT CCTGCTATGG CTGTTAAAAA GAAAAAAGAC TCAAGTCTTG TTAAAGCACT TAGACTTGTT AAGGATAATC AGTGTGAAGC AGTTATATCA GCTGGAAGCA CAGGTGCATT TTTAACAGGA TGTACACTTA TTGTAGGGAG AATAAAAGGG GTTGAAAGAC CTGCTTTAGC ACCAGTTATG CCAGGTAAAA ATGGTCCTTT TATGATAATC GATGCAGGAG CTAACGTTGA TTCTAAACCT TCTTATTTAG TTCAATTTGC TAAAATGGGT GAGGTTTACT TTAAATCTGT TATGGATGTT AATAACCCTA AGGTAGGATT AGTTAATATT GGAGAAGAAG AAGAAAAGGG TAATGACCTT ACAAAGGCTA CTTATAAGCT TCTAAAAGAA GAAAAAGATA TTAACTTTAT TGGAAATGTT GAACCGAGAG AAGTTTCAAC AGGAGATGTA GATGTCTTAG TTTGTGATGG ATTTGTTGGA AATACTGTTT TAAAGATGTA TGAAGGTGTA GCTTCTACAA TATTAAGTAT GATCAAATCA GAAGTTAAAT CATCATTTTT AGCTAAATTA GGAGTACCAT TCTTAGCTCC AGCTTTAATG AACCTTAAGA AAAAAATGGA TTATAAAGAA TATGGTGGAG CACCATTTTT AGGTGTAAAG GGAATATGTG TAAAAGCACA TGGTAGTTCT GATGCAAAAG CTTTTAAAAA TGCAATAAGA CAGGCGAGAA AATTCCATGA AAATGACCTA ATTGGGAAAT TAAGTGAAGA AATCACTAAA AAAAGCTTTG ATAATCAAAA AAAATTTTAA
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Protein sequence | MRIAVDGMGG DHSPSAVVEG CVQALEEFKD IEIYITGPED LLKEAFSKFK YDKERVIFID AKEVISTNEH PAMAVKKKKD SSLVKALRLV KDNQCEAVIS AGSTGAFLTG CTLIVGRIKG VERPALAPVM PGKNGPFMII DAGANVDSKP SYLVQFAKMG EVYFKSVMDV NNPKVGLVNI GEEEEKGNDL TKATYKLLKE EKDINFIGNV EPREVSTGDV DVLVCDGFVG NTVLKMYEGV ASTILSMIKS EVKSSFLAKL GVPFLAPALM NLKKKMDYKE YGGAPFLGVK GICVKAHGSS DAKAFKNAIR QARKFHENDL IGKLSEEITK KSFDNQKKF
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