| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1688 |
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| Symbol | smc |
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| ID | 4205944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1881954 |
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| End bp | 1885511 |
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| Gene Length | 3558 bp |
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| Protein Length | 1185 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 642566238 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_699003 |
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| Protein GI | 110803965 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0515857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTTAA AATCTCTTGA AATAAGGGGA TTTAAATCAT TTGCTGATAA AACAGAATTA
AATTTTAAAA AAGGAATAAC GGCTATAGTT GGGCCTAATG GAAGTGGAAA AAGTAATGTA
TCAGATAGCG TAAGATGGGT TTTAGGGGAG CAAAGTGCTA AAACCTTAAG AGGAGCTAAG
ATGGAAGATG TAATCTTTAC TGGTACAGAA TATAGAAAGC CTATAGGATA TGCACAGGTT
TCTTTAACTT TAGACAATTC TTCAGGGGAA CTCCCTTTAG ATTATTTAGA GGTAAAAGTT
ACTAGAAAAT TATTCCGTTC TGGAGAAAGC GAATATTTAA TAAATAATTC TCCTTGTAGA
TTAAAAGATG TTGTAAACCT ATTTATGGAT ACAGGAATAG GAAAAGAAGG GTATTCGCTT
ATTGGTCAAG GTAAAATAGA CAGTATTCTA AGTGGTAAGC CGGAAGATAG AAGAGCTATT
CTAGAGGAAG CTGCAGGTAT TGTAAAGTTT AAATCTAGAA AGGGTGAAGC TGAGAAAAAG
TTAAAGAATA CGGAAGAAAA CTTAGTTAGA ATAAATGATA TAATTTTTAC TTATGAAGAA
AGATTAGGTC CTTTAGAAGA GGAAAAAAAT AAAGCTTTAA GATATTTAGA GCTTTCAAAT
GAATTAAAGC ACAAAGAAAT TTCATCTATT ATGAGTGAAT TACATAATAT TGATGGGGTT
ATATTAAAGC AAAAAGAAAA GATAAAAGAT TTAATAGCTT TTAATGGTAA GCAAAAAGAA
AAGTACAAAG AAGAAAGAGA GAAAATGTTT GCTTTAAAGG AAGAGTTAGA CTCTTTAGAA
GGTAGTCATT CTAAAAAGCA AGAAGAGTAT TTTGCTAAAA AGGAAGAAAT AAATAAAAGC
TTAGGAAAAG TAAATCTTTT AAATGAAAGA ATTAAAAATA TAGATGAATT AATTCTTAAA
AATAAAGAAG AGTTAGAAGA AAATAAGAAG AAATTAAATG TCTTAATGAA GGAAAAAAAC
TCTATAGAGA AGGATTTTAA TTTAAATAAA AGTAAGTTTG AAAAAGAATT AGAAGAAATT
AATAACTTAG AAAAAGAAGT TAATGAACTT AACTTAAAAT TTATTTCTAA GGAAAAAGAA
ATTAAAAAGA TAAAGGATGA GGAATTAGAA CTTTTAAAAA GGGTTTCTTT ATCTAAAAAT
AAAATGACAA TGTTAGAAAG TGAATTGAGT AACATAAATG AAAAACTTGA TTCATCAAAA
AGCAAACAAG TAAATTATGA TAATTCATTA AAAATTAATT TAGCAACTAA TTTAAATCTT
CAAAAAGAGC TTCAAATTAT AGAAGAAGAA AAGAAAGATA AAGAGAGAGA ATTAAGGGAA
AAAGAAGAAG AGTTTAGAGA AGGTTTAAAA ATAATTAAGG AAACTCAAGG TAAACTTAAT
CAAATTTTAT CAAAGGTAAA TAAGGTTGAA GCTAATAAAG AAATGCTAAA AAAATTAGAA
AATCAATATG AAGGATACAA CCTTTCAGTA AAGAAAATAA TGGCTAGTGT AGATGCTGGA
CGTGTAAAAA TAAATAAAAA CAAATGCAAG GTTTTAGGAG AGGTTGTGGA AACTAAGGCT
GGATATGAAA CTTCTATTGA AGTAGCCTTA GGTGGAAGTA TTTCTAATAT TATAACTGAA
GATGAGGAAG TTGCAAAAGT TCTTATTAAT CATCTTAGAG AAAATAAGCT AGGAAGAGCT
ACATTCTTAC CATTATCAAT AATAAGAGGT AAGAAGTTAG AACTTAGCAA AAATATAGTT
GAAAGTGAAG GGTTCTTAGG AATAGCTTCA GATTTAGTAA ACTTTAAAGA GGTTTATAAT
AATGTTATAA ATTATGTATT AGGTAAAACT ATAATATGTG ATAATATAGA TAATGCCATA
AAAATTGCTA AAATGCTTAA TTATAGACAT AAGATTGTTA CCTTGTCTGG TGAGGTTGTA
AATGCAGGTG GAGCACTTAC AGGTGGTAGC CTTTATCAAA AAAACACAGG TATAATGTCT
AGAAAAAATG AAGTTAAAGC TTTAGAGGAT GAATTAGTTA GGGTAAAAAA TGAAGAGCAC
ATACTAACTA AAGAATTGGA AAAGTTAAAT AGGAATCAAG AAGAGTTAAG CATAAAAAAA
CAAGAAATTA TAGATAAAAT ATATGAAAAG AATCTAGAAT TAGCGGACTT AAATAACAAG
ATTAAAAATG TTAATGATGA AACTTTTAAA ATAAAGAATT CTATAAAATC TTTAGATTTA
GAGCTTAAGG ATATTGATTC AAGAAAGATT AGGATAGTCA AAGAAATTGA AATTGTTAAT
GAAAAGATTA GTCAATATGA AAACAAAGAA GTAACTAATT CAGAAAAGGT AAAGGAATTA
GATAAGAAAC GTGAAGAACT TTCAAAAACT CTTTCTAAAT ATAAAGATAA GCTTACTAAT
ATGAAAATAA ATAAAGCTAA GCTTCAAGAA GTTATTGAGG GAAGAGAAAA GGAAGCTAAT
AGAATAAATT CTTCTATAGA AGAAGTGGAA AATAAGCTTA TAAATATTAC TAAGTACTTA
GAAGATATAA AAACTAATAA GGAAGAAAGT AAAAAAGAAA TAGTTTTATG TGAGAAATTC
ATAAAAGAAG AGGAAGTAAA TATAATTACT CTTGAAGAGA ACTTTAAATC CTTTGAACTT
AAAAAAGGTA AGTTAAAAGA GAACATAAGC TCTGCTGAGA ATATCTTAGA AGTTCTTTCA
GTTGAAATAG CTAAAAAGGA AGAAGAAGTT CATAAAAATG ATATAACTTA TACAAAACAA
GAAAATGAAA AAAATATCTT AAACAAAAGA CTTCTAGAAG AATTTAATAC AAGTTTTGAA
GAAGAGAAAA ATAGATTTAA GCCTATTGAA GATATGGATT CTCATAAGGT TAGGATATCA
ACTCTTAAAG CTAGAATAAC TGGTTTAGGA AATGTAAATG TAAATGCTAT TGAAGAATTT
AAAGAAATAT CTGAGAAGTA TAATTTTATG ACAACAGAAA GAGATGATTT AGAAAAAGCT
AAGGAAGAAC TTTTAAATGT TATAGAAGAA ATGACATCTA AGATGAGAGC AGTCTTTAGA
CAAAACTTTA ATATTTTAAA TAAGCTATTT GATGAGACCT TTAAAGAATT ATTTAAAGGT
GGTAGTGCAA AGCTTGTTTT AGGTGAGGGT GACGAACTTA CAGGAAATAT AGACATAAAT
GTTCAACCAC CAGGAAAGAA GCTTCAAAAT ATTAATCTTA TGTCTGGAGG AGAGAAGGTT
TTATCTGCTA TAGCTTTATT ATTCTCTATA TTAAAGATGA AACCTACACC ATTCTGTATT
TTAGATGAAA TTGAGGCTGC CTTAGATGAT GCCAATGTAA GAAGATATGC AGAGTTTTTA
GGTAAGTTTA GAGATAATAC TCAGTTTATA GTAATAACAC ATAGAAAAGG TACTATGGAA
GCTGCTGATG TTATGTATGG AGTTACTATG GAAGAGAAAG GTATATCTAA AATTGTTTCA
GTAGACTTGG ACAAATAG
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| Protein sequence | MFLKSLEIRG FKSFADKTEL NFKKGITAIV GPNGSGKSNV SDSVRWVLGE QSAKTLRGAK
MEDVIFTGTE YRKPIGYAQV SLTLDNSSGE LPLDYLEVKV TRKLFRSGES EYLINNSPCR
LKDVVNLFMD TGIGKEGYSL IGQGKIDSIL SGKPEDRRAI LEEAAGIVKF KSRKGEAEKK
LKNTEENLVR INDIIFTYEE RLGPLEEEKN KALRYLELSN ELKHKEISSI MSELHNIDGV
ILKQKEKIKD LIAFNGKQKE KYKEEREKMF ALKEELDSLE GSHSKKQEEY FAKKEEINKS
LGKVNLLNER IKNIDELILK NKEELEENKK KLNVLMKEKN SIEKDFNLNK SKFEKELEEI
NNLEKEVNEL NLKFISKEKE IKKIKDEELE LLKRVSLSKN KMTMLESELS NINEKLDSSK
SKQVNYDNSL KINLATNLNL QKELQIIEEE KKDKERELRE KEEEFREGLK IIKETQGKLN
QILSKVNKVE ANKEMLKKLE NQYEGYNLSV KKIMASVDAG RVKINKNKCK VLGEVVETKA
GYETSIEVAL GGSISNIITE DEEVAKVLIN HLRENKLGRA TFLPLSIIRG KKLELSKNIV
ESEGFLGIAS DLVNFKEVYN NVINYVLGKT IICDNIDNAI KIAKMLNYRH KIVTLSGEVV
NAGGALTGGS LYQKNTGIMS RKNEVKALED ELVRVKNEEH ILTKELEKLN RNQEELSIKK
QEIIDKIYEK NLELADLNNK IKNVNDETFK IKNSIKSLDL ELKDIDSRKI RIVKEIEIVN
EKISQYENKE VTNSEKVKEL DKKREELSKT LSKYKDKLTN MKINKAKLQE VIEGREKEAN
RINSSIEEVE NKLINITKYL EDIKTNKEES KKEIVLCEKF IKEEEVNIIT LEENFKSFEL
KKGKLKENIS SAENILEVLS VEIAKKEEEV HKNDITYTKQ ENEKNILNKR LLEEFNTSFE
EEKNRFKPIE DMDSHKVRIS TLKARITGLG NVNVNAIEEF KEISEKYNFM TTERDDLEKA
KEELLNVIEE MTSKMRAVFR QNFNILNKLF DETFKELFKG GSAKLVLGEG DELTGNIDIN
VQPPGKKLQN INLMSGGEKV LSAIALLFSI LKMKPTPFCI LDEIEAALDD ANVRRYAEFL
GKFRDNTQFI VITHRKGTME AADVMYGVTM EEKGISKIVS VDLDK
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